Salt-induced transcription factor MYB74 is regulated by the RNA-directed DNA methylation pathway in Arabidopsis
R Xu, Y Wang, H Zheng, W Lu, C Wu… - Journal of …, 2015 - academic.oup.com
… Transcription factors and RNA-directed DNA methylation (RdDM) play an important role in …
upstream of the transcription initiation site of AtMYB74, which is heavily methylated. Levels of …
upstream of the transcription initiation site of AtMYB74, which is heavily methylated. Levels of …
Pan-cancer predictions of transcription factors mediating aberrant DNA methylation
D Detilleux, YG Spill, D Balaramane, M Weber… - Epigenetics & …, 2022 - Springer
… predict transcription factors that lead to hyper-methylated regions upon transcription factor
loss … Finally, we validate that FOXA1 and GATA3 mediate hypo-methylated regions in breast …
loss … Finally, we validate that FOXA1 and GATA3 mediate hypo-methylated regions in breast …
Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites
A Hogart, J Lichtenberg, SS Ajay, S Anderson… - Genome …, 2012 - genome.cshlp.org
… of transcription factors and methylation To further investigate the relationship between DNA
methylation and transcription factor … transcription factor motifs. Table 4 contains a list of all …
methylation and transcription factor … transcription factor motifs. Table 4 contains a list of all …
Impact of cytosine methylation on DNA binding specificities of human transcription factors
… factors to DNA—in some cases negatively and in others positively. Our finding … transcription
factors prefer to bind to mCpG sites can inform future analyses of the role of DNA methylation …
factors prefer to bind to mCpG sites can inform future analyses of the role of DNA methylation …
DNA methylation: old dog, new tricks?
CG Spruijt, M Vermeulen - Nature structural & molecular biology, 2014 - nature.com
… of transcription. This is evidenced by the fact that transcription factors can interact with methylated
DNA … This paper shows that the transcription factor C/EBPα binds to a methylated CRE …
DNA … This paper shows that the transcription factor C/EBPα binds to a methylated CRE …
How does DNA methylation repress transcription?
… ) bind less well to methylated recognition elements; however, the … that DNA methylation would
function to repress transcription … transcription factors. The second possibility is that specific …
function to repress transcription … transcription factors. The second possibility is that specific …
A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network
ST Lee, Y Xiao, MO Muench, J Xiao… - Nucleic acids …, 2012 - academic.oup.com
… We examined DNA methylation and RNA expression status during early B-cell … DNA
methylation scanning and expression arrays. Features of promoter and gene body DNA methylation …
methylation scanning and expression arrays. Features of promoter and gene body DNA methylation …
Regulation of UGT1A1 and HNF1 transcription factor gene expression by DNA methylation in colon cancer cells
AS Bélanger, J Tojcic, M Harvey, C Guillemette - BMC molecular biology, 2010 - Springer
… DNA methylation may repress transcription by sterically hindering the binding of activating
transcription factors … Similarly, treatment with DNA methylation inhibitors enable binding of …
transcription factors … Similarly, treatment with DNA methylation inhibitors enable binding of …
Analysis method of epigenetic DNA methylation to dynamically investigate the functional activity of transcription factors in gene expression
W Feng, Z Dong, B He, K Wang - BMC genomics, 2012 - Springer
… profiling in gene promoter regions, we present a method to investigate transcription factors
that are affected by DNA methylation and that are functionally active in gene expression. …
that are affected by DNA methylation and that are functionally active in gene expression. …
Breaking the silence: the interplay between transcription factors and DNA methylation
B Baron - 2012 - um.edu.mt
… Methylation of the CpG at the centre of the CRE sequence inhibits transcription, by inhibiting
transcription factor binding, indicating that methylation at specific CpG sites can contribute …
transcription factor binding, indicating that methylation at specific CpG sites can contribute …