Signal processing methods for music transcription

A Klapuri, M Davy - 2007 - books.google.com
… to describe algorithms and models for the different subtopics of music transcription, including
… for metre analysis, percussion transcription, and pitched musical instrument classification. …

UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy

T Smith, A Heger, I Sudbery - Genome research, 2017 - genome.cshlp.org
… For example, in RNA-seq, highly expressed transcripts are more … number of bases different
(edit distance) between UMIs at a … and can improve classification by hierarchical clustering. …

[图书][B] Talking data: Transcription and coding in discourse research

JA Edwards, MD Lampert - 2014 - taylorfrancis.com
… Just as the number and type of prepositions differ across languages, so too the number
and meaning of transcription categories differ across transcription systems. For example, a “short…

[HTML][HTML] Noncoding RNA gene detection using comparative sequence analysis

E Rivas, SR Eddy - BMC bioinformatics, 2001 - Springer
… Noncoding RNA genes produce transcripts that exert their … The Inside algorithm for scoring
a pair-SCFG against a fixed … algorithm is dominated by the Inside algorithm for scoring the …

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine

L Kong, Y Zhang, ZQ Ye, XQ Liu, SQ Zhao… - Nucleic acids …, 2007 - academic.oup.com
algorithm and standalone software named CONC was published that classifies transcripts
… Known for its high accuracy and good performance, SVM is a widely used classification tool

[PDF][PDF] Measuring dialect pronunciation differences using Levenshtein distance

WJ Heeringa - 2004 - research.rug.nl
transcribing them. For our purpose of quantifying dialect distances we use a feature system
… (see Section 5.1), not to histogram distances as calculated in the corpus frequency method

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

JC Bryne, E Valen, MHE Tang, T Marstrand… - Nucleic acids …, 2007 - academic.oup.com
transcription factors Multi-cellular eukaryotes Matrix-to-matrix comparison and classification,
… using the UPGMA algorithm with a Pearson Correlation Coefficient distance metric. Then …

[图书][B] Text algorithms

M Crochemore, W Rytter - 1994 - books.google.com
… The automatic transcription of these gels into sequences is a … edit distance problem : compute
the minimal number of edit … techniques and the classification of algorithms according to the …

[HTML][HTML] Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

EY Chen, CM Tan, Y Kou, Q Duan, Z Wang… - BMC …, 2013 - Springer
… how the different scoring methods rank putative … of transcription factors ranks because some
transcription factors have multiple entries in ChEA. The results show that the second method

Fast and reliable prediction of noncoding RNAs

S Washietl, IL Hofacker… - Proceedings of the …, 2005 - National Acad Sciences
… We report an efficient method for detecting functional RNAs. … The discovery of a diverse
array of transcripts that are not … Our SVM classification model currently is trained only for up …