[HTML][HTML] Anaerobic fungi contain abundant, diverse, and transcriptionally active Long Terminal Repeat retrotransposons

TA Navaratna, N Alansari, AR Eisenberg… - Fungal Genetics and …, 2024 - Elsevier
transcriptional activity of LTR retrotransposons across several species of the early-branching
Neocallimastigomycota, otherwise known as the anaerobic gut fungi … % of anaerobic fungal

PCR and omics based techniques to study the diversity, ecology and biology of anaerobic fungi: insights, challenges and opportunities

JE Edwards, RJ Forster, TM Callaghan… - Frontiers in …, 2017 - frontiersin.org
… regarding anaerobic fungal diversity will … anaerobic fungi display niche differentiation. As
a consequence, there is a need to move beyond the broad generalization of anaerobic fungi as …

Aerobic and anaerobic fungal metabolism and Omics insights for increasing polycyclic aromatic hydrocarbons biodegradation

S Aydin, HA Karaçay, A Shahi, S Gökçe, B Ince… - Fungal Biology …, 2017 - Elsevier
… interest, while transcriptional studies associated to PAH conversion are rare. Therefore,
further studies with transcriptional methods are needed. However, in fungal species adapted to …

ChIP-seq and In Vivo Transcriptome Analyses of the Aspergillus fumigatus SREBP SrbA Reveals a New Regulator of the Fungal Hypoxia Response and Virulence

D Chung, BM Barker, CC Carey, B Merriman… - PLoS …, 2014 - journals.plos.org
… Together, our data suggest that transcriptional activity of SrbA homodimer is efficient to
activate erg3B, erg5, erg11A, and niaD, and an SrbA homodimer might be a preferred or …

Transcriptional analysis of genes for energy catabolism and hydrolytic enzymes in the filamentous fungus Aspergillus oryzae using cDNA microarrays and expressed …

H Maeda, M Sano, Y Maruyama, T Tanno… - Applied microbiology …, 2004 - Springer
… oryzae ESTs are available from the Database of genomes and transcriptional regulations
for filamentous fungi on the website of the Research Information Database (RIO-DB) at the …

Hydrogenosome, Pairing Anaerobic Fungi and H2-Utilizing Microorganisms Based on Metabolic Ties to Facilitate Biomass Utilization

J Ma, P Zhong, Y Li, Z Sun, X Sun, M Aung, L Hao… - Journal of Fungi, 2022 - mdpi.com
… an important part of the development of anaerobic fungi as model organisms that can effectively
… of anaerobic fungi and the metabolism and function of anaerobic fungal hydrogensome, …

Anaerobic fungi: past, present, and future

M Hess, SS Paul, AK Puniya… - Frontiers in …, 2020 - frontiersin.org
Anaerobic fungi were reported to be present in domesticated and non-domesticated equine
species, with the AF community composition in horses and ponies being more similar to …

Analysis of wide-domain transcriptional regulation in solid-state cultures of Aspergillus oryzae

SM McKelvey, RA Murphy - Journal of Industrial Microbiology …, 2010 - academic.oup.com
… documented to be controlled at the level of transcription, it became apparent in this study …
in a fungal system. The regulation of gene expression begins at the level of transcription of …

Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of Pecoramyces sp. F1 in Monoculture and Co-culture With a …

Y Li, Y Li, W Jin, TJ Sharpton, RI Mackie… - Frontiers in …, 2019 - frontiersin.org
… By combining the foregoing analysis with the anaerobic fungal … of the archaeon on the
metabolism of the anaerobic fungus. … up-regulated genes at the transcriptional level in the co-…

The biotechnological potential of anaerobic gut fungi

V Flad, D Young, S Seppälä, C Hooker… - Genetics and …, 2020 - Springer
anaerobic gut fungi (Neocallimastigomycota), first described almost 50 years ago, hold
extraordinary potential for biotechnology. Anaerobic fungi … and exploit anaerobic fungal enzymes, …