Transcriptional activity of transposable elements in maize

CM Vicient - BMC genomics, 2010 - Springer
… We have investigated the transcriptional activity of 56 families of transposable elements in
… At least 1.5% maize ESTs show sequence similarity with transposable elements. According …

A genome-wide transcriptional activity survey of rice transposable element-related genes

Y Jiao, XW Deng - Genome biology, 2007 - Springer
… To obtain a comprehensive picture of the transcriptional activity of TE-related genes, we
assembled their transcription profiles into a collection of 15 datasets acquired from various …

Regulatory activities of transposable elements: from conflicts to benefits

EB Chuong, NC Elde, C Feschotte - Nature Reviews Genetics, 2017 - nature.com
… those mapping transcriptional activity, open chromatin or binding of transcription factors have
… the biochemical hallmarks of active regulatory elements. Together, these studies indicate …

Roles of transposable elements in the regulation of mammalian transcription

R Fueyo, J Judd, C Feschotte, J Wysocka - Nature reviews Molecular …, 2022 - nature.com
… their transcription in the germline or its progenitors to successfully propagate. Indeed, the
transcriptional activity … share many transcriptional features, rely on a partially overlapping set of …

Transcriptional Activity, Chromosomal Distribution and Expression Effects of Transposable Elements in Coffea Genomes

FR Lopes, D Jjingo, CRM Da Silva, AC Andrade… - PLoS …, 2013 - journals.plos.org
… [10], and readout transcription [11]. While the transcriptional activity of TEs seems to be tightly
controlled by host genomes [12], eg by transcriptional gene silencing mechanisms such as …

Transcriptional activity and epigenetic regulation of transposable elements in the symbiotic fungus Rhizophagus irregularis

A Dallaire, BF Manley, M Wilkens, I Bista… - Genome …, 2021 - genome.cshlp.org
… Here, we assessed the potential of transposable elements for generating such genomic …
development suggests ongoing TE activity. We find Mutator-like elements located near genes …

Transposable element proliferation and genome expansion are rare in contemporary sunflower hybrid populations despite widespread transcriptional activity of LTR …

T Kawakami, P Dhakal, AN Katterhenry… - Genome Biology and …, 2011 - academic.oup.com
… petiolaris may be a catalyst for transposable element … itself, a major trigger of transposable
element proliferation, and that … , we detect widespread transcriptional activity of Ty3/gypsy and …

Transposable elements as essential elements in the control of gene expression

A Gebrie - Mobile DNA, 2023 - Springer
… overlapping collection of transcription factors, and have widely permissive chromatin
landscapes that may further enhance TE activation and have transcriptional activity of TEs that is …

Transcriptional activity of transposable elements in coelacanth

M Forconi, D Chalopin, M Barucca… - … Zoology Part B …, 2014 - Wiley Online Library
… General genomic stasis might also imply a decrease of transposable elements activity.
To evaluate the potential activity of transposable elements (TEs) in “living fossil” species, …

Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa

G Wos, RR Choudhury, F Kolář, C Parisod - Mobile DNA, 2021 - Springer
… survey captures specific transcriptional activity of particular … showed different transcriptional
activity between foothill and … with transcriptional activity under stress, LINE elements were …