Transcriptional landscape of B cell precursor acute lymphoblastic leukemia based on an international study of 1,223 cases

JF Li, YT Dai, H Lilljebjörn, SH Shen… - Proceedings of the …, 2018 - National Acad Sciences
… We reanalyzed the transcriptomic landscape of 1,223 BCP ALLs and identified 14 subgroups
based on their transcriptional profiles. Eight of these (G1 to G8) are previously well-known …

The transcriptional landscape of αβ T cell differentiation

M Mingueneau, T Kreslavsky, D Gray, T Heng… - Nature …, 2013 - nature.com
… The differentiation of αβT cells from thymic precursors is a complex process essential for …
of thymic precursors gives rise to mature T cell transcriptomes. We found that early T …

[HTML][HTML] The transcriptional landscape of hematopoietic stem cell ontogeny

S McKinney-Freeman, P Cahan, H Li, SA Lacadie… - Cell stem cell, 2012 - cell.com
… We discovered that HSCs exist in only three distinct transcriptional states during … the
transcriptional signature of their endothelial precursors. Ultimately, we compared the transcriptional

The single-cell transcriptional landscape of mammalian organogenesis

J Cao, M Spielmann, X Qiu, X Huang, DM Ibrahim… - Nature, 2019 - nature.com
… Here we investigate the transcriptional dynamics of mouse organogenesis at single-cell
We explore the dynamics of gene expression within cell types and trajectories over time, …

A comprehensive single cell transcriptional landscape of human hematopoietic progenitors

D Pellin, M Loperfido, C Baricordi, SL Wolock… - Nature …, 2019 - nature.com
… Using single-cell RNA-Seq, we show that existing approaches to stratify bone marrow
CD34+ cells reveal a hierarchically-structured transcriptional landscape of hematopoietic …

Transcriptional landscape of the prenatal human brain

JA Miller, SL Ding, SM Sunkin, KA Smith, L Ng… - Nature, 2014 - nature.com
… DLX1 and DLX2, homeobox transcription factors essential for interneuron migration and …
transcriptional programs associated with these cells in both structures are highly similar. …

Transcriptional landscape of the human cell cycle

Y Liu, S Chen, S Wang, F Soares… - Proceedings of the …, 2017 - National Acad Sciences
transcriptional landscape across the cell cycle. We revealed lag between transcription and
steady-state RNA expression at the cell-… amount of active transcription during early mitosis. In …

Landscape of transcription in human cells

S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann… - Nature, 2012 - nature.com
… , our genome-wide compilation of subcellular localized and product-precursor-related
RNAs serves as a public resource and reveals new and detailed facets of the RNA landscape. …

Chromatin accessibility landscape of pediatric T‐lymphoblastic leukemia and human T‐cell precursors

B Erarslan‐Uysal, JB Kunz, T Rausch… - EMBO molecular …, 2020 - embopress.org
We aimed at identifying the developmental stage at which leukemic cells of pediatric T‐ ALL
s are arrested and at defining leukemogenic mechanisms based on ATAC ‐Seq. Chromatin …

The chromatin landscape and transcription factors in T cell programming

EV Rothenberg - Trends in immunology, 2014 - cell.com
… as a hematopoietic stem cell that can give rise to all possible blood cell types, eventually
through a committed T cell precursor that can still generate multiple classes of T cell, through a …