Linkage analysis, GWAS, transcriptome analysis to identify candidate genes for rice seedlings in response to high temperature stress

Z Wei, Q Yuan, H Lin, X Li, C Zhang, H Gao, B Zhang… - BMC plant biology, 2021 - Springer
… These homologous genes on the one hand confirm the accuracy of the experimental
results, on the other hand, further narrow the range of candidate genes in this study. …

Genome-Wide Association Analysis Coupled With Transcriptome Analysis Reveals Candidate Genes Related to Salt Stress in Alfalfa (Medicago sativa L.)

F He, C Wei, Y Zhang, R Long, M Li, Z Wang… - Frontiers in Plant …, 2022 - frontiersin.org
… MYB-, CBF-, NAC-, and bZIP-encoding genes. Combining the results of our … analysis and
transcriptome analysis, we identified a total of eight candidate genes (five candidate genes for …

Identification of candidate genes controlling oil content by combination of genome-wide association and transcriptome analysis in the oilseed crop Brassica napus

Z Xiao, C Zhang, F Tang, B Yang, L Zhang, J Liu… - Biotechnology for …, 2019 - Springer
… The combination of GWAS and transcriptome analyses revealed seven candidate genes
located within the confidence intervals of significant SNPs. Current findings provide valuable …

Transcriptome analysis of Brassica napus pod using RNA-Seq and identification of lipid-related candidate genes

HM Xu, XD Kong, F Chen, JX Huang, XY Lou, JY Zhao - BMC genomics, 2015 - Springer
… snapshot on the genes responsible for oil accumulation in. To identify candidate genes in the
analyze the pod transcriptomes of German cultivar Sollux and Chinese inbred line Gaoyou. …

Genome-Wide Association and Transcriptome Analyses Reveal Candidate Genes Underlying Yield-determining Traits in Brassica napus

K Lu, L Peng, C Zhang, J Lu, B Yang, Z Xiao… - Frontiers in plant …, 2017 - frontiersin.org
… of the genetic control of YDTs, and to identify candidate genes to … We also sequenced the
transcriptomes of eight tissues from high… Finally, differentially expressed candidate genes were …

Transcriptome Analysis of the Oil-Rich Tea Plant, Camellia oleifera, Reveals Candidate Genes Related to Lipid Metabolism

EH Xia, JJ Jiang, H Huang, LP Zhang, HB Zhang… - PLoS …, 2014 - journals.plos.org
… as candidate genetic markers for the future studies. To examine the dynamic evolution of
othologous genes between C. sinensis and C. oleifera, we identified 3,022 pairs of orthogous …

[HTML][HTML] Identifying candidate genes and patterns of heat-stress response in rice using a genome-wide association study and transcriptome analyses

Y Yang, C Zhang, D Zhu, H He, Z Wei, Q Yuan, X Li… - The Crop Journal, 2022 - Elsevier
… The objectives of this study were to identify candidate genes and characterize their
response patterns during rice adaptation to high temperatures at the seedling stage. Ten heat-…

Combined genome‐wide association study and transcriptome analysis reveal candidate genes for resistance to Fusarium ear rot in maize

L Yao, Y Li, C Ma, L Tong, F Du… - Journal of integrative plant …, 2020 - Wiley Online Library
… Integration of the GWAS and transcriptome data We are very interested in candidate genes
… Among the 69 genes detected in the GWAS, 58 were expressed in 15-d-old kernels based …

Transcriptome analyses reveal candidate genes potentially involved in Al stress response in alfalfa

W Liu, C Xiong, L Yan, Z Zhang, L Ma… - Frontiers in Plant …, 2017 - frontiersin.org
genes in alfalfa on a genome-wide scale. Currently, to our knowledge, the genome-wide
transcriptomic analysis of the Al-responsive genes … the first global transcriptome analysis of the …

Transcriptome analysis reveals candidate genes related to phosphorus starvation tolerance in sorghum

J Zhang, F Jiang, Y Shen, Q Zhan, B Bai, W Chen… - BMC plant biology, 2019 - Springer
… A total of 2089 candidate genes related to P starvation tolerance were revealed and found …
Gene Ontology (GO) enrichment analyses showed that the candidate genes were associated …