[HTML][HTML] Transcriptome analysis of hexaploid hulless oat in response to salinity stress

B Wu, Y Hu, P Huo, Q Zhang, X Chen, Z Zhang - PloS one, 2017 - journals.plos.org
… -treated oat. The dynamic transcriptome expression profiles of salt-stressed oat obtained in
… useful insights for further analyses of the salinity tolerance mechanism in oat. Moreover, the …

Analysis of the transcriptome and heat-shock protein (HSP) family expression in the spikelets of hulless oat (Avena sativa L.) under heat stress

WJ Jung, CS Ko, YW Seo - Plant Growth Regulation, 2024 - Springer
… involving transcriptome analysis … of oat genes to high temperatures and the HSPs in the oat
genome have not yet been investigated. In this study, we performed RNA-seq analysis on oat

[HTML][HTML] Analysis and annotation of the hexaploid oat seed transcriptome

JJ Gutierrez-Gonzalez, ZJ Tu, DF Garvin - BMC genomics, 2013 - Springer
… NGS has made possible high-throughput transcriptome sequencing (RNA-Seq), giving rise
oat seed transcriptome, four independent cDNA libraries were constructed from de-hulled oat

[HTML][HTML] … novo transcriptome assembly and comparative analysis highlight the primary mechanism regulating the response to selenium stimuli in oats (Avena sativa L.)

T Liu, X Liu, R Zhou, H Chen, H Zhang… - Frontiers in Plant …, 2021 - frontiersin.org
transcriptome analysis, we suspect that the high-affinity sulfur transporter Sultr1;2 plays a key
role in selenate uptake in oats… This cultivar is a hulled oat widely grown in Qinghai Province…

[HTML][HTML] Integrated Physiological and Transcriptomic Analyses Responses to Altitude Stress in Oat (Avena sativa L.)

Y Jinqiu, L Bing, S Tingting, H Jinglei, KL Zelai… - Frontiers in …, 2021 - frontiersin.org
… In order to understand the mechanisms of oats adapting to high altitudes, we … and
transcriptome sequence analysis. The physiological and agronomical results showed that oats

[HTML][HTML] Stem lodging resistance in hulless barley: Transcriptome and metabolome analysis of lignin biosynthesis pathways in contrasting genotypes

M Yu, M Wang, T Gyalpo, Y Basang - Genomics, 2021 - Elsevier
… For example, low lignin content in culm of oat, wheat, buckwheat and rice … transcriptome
analysis reported 5966 novel genes that will benefit future genome annotation efforts in hulless

Integrative analysis of transcriptome and metabolome reveal mechanism of tolerance to salt stress in oat (Avena sativa L.)

Z Xu, X Chen, X Lu, B Zhao, Y Yang, J Liu - Plant Physiology and …, 2021 - Elsevier
oat cultivars with varied salt tolerance levels to unravel adaptive responses to salt stress by
metabolomic and transcriptomicTranscriptomic analysis revealed that gene expressions in …

[HTML][HTML] Transcriptome Assembly and Analysis of Tibetan Hulless Barley (Hordeum vulgare L. var. nudum) Developing Grains, with Emphasis on Quality Properties

X Chen, H Long, P Gao, G Deng, Z Pan, J Liang… - PloS one, 2014 - journals.plos.org
… novo transcriptome sequencing and analyses of the developing grains from two Tibetan
hulless … We further analyzed the transcripts related to seed storage protein, starch, and β-glucan …

[HTML][HTML] Reference genome assemblies reveal the origin and evolution of allohexaploid oat

Y Peng, H Yan, L Guo, C Deng, C Wang, Y Wang… - Nature Genetics, 2022 - nature.com
transcriptome data between 10 hulled and 12 hulless oats, we found A.satnudSFS4D01G000045
is differentially expressed with hulless oats … full-length transcriptome sequencing using …

Various temperature effects on spikelet growth in hulless oat during grain-filling stage

CS Ko, JS Lee, YW Seo - Agricultural and Food Science, 2022 - journal.fi
… Currently, there is no comprehensive and widely annotated oat reference genome, and only
a few transcriptome analyses have been reported … As transcriptome data do not always align …