A comparative transcriptome analysis leads to new insights into the molecular events governing root formation in mulberry softwood cuttings

W Du, Y Ban, H Nie, Z Tang, X Du, J Cheng - Plant molecular biology …, 2016 - Springer
… type of root formation is available. Here, we compared transcriptome changes during different
root formation … the molecular mechanisms of root formation in mulberry softwood cuttings. …

[HTML][HTML] Transcriptome analysis reveals multiple hormones, wounding and sugar signaling pathways mediate adventitious root formation in apple rootstock

K Li, Y Liang, L Xing, J Mao, Z Liu, F Dong… - International journal of …, 2018 - mdpi.com
… for the regulation of root regeneration is lacking. … formation in apple rootstocks, a transcriptomic
approach was used in the present study to identify genes associated with AR formation

[HTML][HTML] Transcriptomic analysis reveals ethylene as stimulator and auxin as regulator of adventitious root formation in petunia cuttings

U Druege, P Franken, S Lischewski… - Frontiers in Plant …, 2014 - frontiersin.org
… AR formation from 2 to 192 hours post-excision (hpe) of cuttings, transcriptome analysis by
microarray revealed a change of the character of the rooting zone from SB to root identity. The …

[HTML][HTML] Transcriptome analysis reveals multiple genes and complex hormonal-mediated interactions with PEG during adventitious root formation in apple

S Li, MM Tahir, T Wu, L Xie, X Zhang, J Mao… - International Journal of …, 2022 - mdpi.com
… We performed a transcriptomic analysis to identify the responses behind the phenotype. A
total of 3204 differentially expressed genes (DEGs) were identified between CK and PEG, with …

[HTML][HTML] Comparative transcriptome analysis revealed the cooperative regulation of sucrose and IAA on adventitious root formation in lotus (Nelumbo nucifera Gaertn)

C Libao, Z Minrong, H Zhubing, L Huiying, L Shuyan - BMC genomics, 2020 - Springer
… Therefore, AR formation in seedlings is very important for lotus breeding due to its effect
on … As lotus ARs formation was significantly affected by sucrose treatment, we analyzed the …

[HTML][HTML] An Integrated Transcriptome and Proteome Analysis Reveals Putative Regulators of Adventitious Root Formation in Taxodium 'Zhongshanshan'

Z Wang, J Hua, Y Yin, C Gu, C Yu, Q Shi, J Guo… - International Journal of …, 2019 - mdpi.com
… an analysis of AR-formation mechanisms at three developmental stages (… formation of calli,
primary root formation and the root-elongation period) by integrating a transcriptome analysis

[HTML][HTML] … transcriptome analysis unravels the existence of crucial genes regulating primary metabolism during adventitious root formation in Petunia hybrida

A Ahkami, U Scholz, B Steuernagel, M Strickert… - PLoS …, 2014 - journals.plos.org
… initiation and formation of adventitious roots (AR), a microarray-based transcriptome analysis
in … derived from different stages of AR formation. After exclusion of wound-responsive and …

Transcriptome analysis for identifying possible gene regulations during maize root emergence and formation at the initial growth stage

SG Hwang, KH Kim, BM Lee, JC Moon - Genes & genomics, 2018 - Springer
… The root plays an important role during plant development and growth, ie, … root-specific
genes at the initial developmental stages of maize by using network-based transcriptome analysis

[HTML][HTML] Transcriptome Analysis of Early Lateral Root Formation in Tomato

A Zhang, Q Shang - Plants, 2024 - mdpi.com
… of LR formation in tomato, we performed a comprehensive transcriptome analysis on nine
root … Our tomato root tissue transcriptome sequencing resulted in 34,753 genes mapped to the …

Transcriptome analysis reveals the inhibitory nature of high nitrate during adventitious roots formation in the apple rootstock

X Zhang, MM Tahir, S Li, J Mao, MA Nawaz… - Physiologia …, 2021 - Wiley Online Library
… nitrate on root formation in the plants; however, nitrate signaling pathways regulating roots
are … Different nitrate signaling pathways have distinct influences on root formation, depending …