[HTML][HTML] Ecological Adaption Analysis of the Cotton Aphid (Aphis gossypii) in Different Phenotypes by Transcriptome Comparison

ZQ Li, S Zhang, JY Luo, CY Wang, LM Lv, SL Dong… - PloS one, 2013 - journals.plos.org
Transcriptome changes in different life stages In this study, comparative analysis of two
transcriptomes in different life stages was used to determine gene expression. Although more …

[HTML][HTML] Pathway analysis of the transcriptome and metabolome of salt sensitive and tolerant poplar species reveals evolutionary adaption of stress tolerance …

D Janz, K Behnke, JP Schnitzler, B Kanawati… - BMC Plant …, 2010 - Springer
… We, therefore, conclude that interspecific transcriptome comparisons using Poplar Genome
… filtering procedures, whereas comparisons within a phylogenetic section are unproblematic. …

[HTML][HTML] Adaptation insights from comparative transcriptome analysis of two Opisthopappus species in the Taihang mountains

N Chen, H Zhang, E Zang, ZX Liu, YF Lan, WL Hao… - BMC genomics, 2022 - Springer
… and compare transcriptional responses between phylogenetically species, and
especially useful at the level of functional categories in cross-species comparisons [37]. This …

[HTML][HTML] Liver transcriptome analysis reveals important factors involved in the metabolic adaptation of the transition cow

NT Ha, C Drögemüller, C Reimer, F Schmitz-Hsu… - Journal of dairy …, 2017 - Elsevier
… a differential gene expression analysis (DGEA) and gene-set enrichment analysis (GSEA) …
processes involved in the metabolic adaptation interact. Comparing our main results with the …

[HTML][HTML] Genome and Transcriptome Analyses Provide Insight into the Euryhaline Adaptation Mechanism of Crassostrea gigas

J Meng, Q Zhu, L Zhang, C Li, L Li, Z She, B Huang… - PLoS …, 2013 - journals.plos.org
… In order to further validate the important roles of FAAs metabolism for oyster salt stress
adaptation, we conducted genes expressions comparisons between low salinity adapted …

Comparative whole genome transcriptome analysis of three Plasmodium falciparum strains

M Llinas, Z Bozdech, ED Wong, AT Adai… - Nucleic acids …, 2006 - academic.oup.com
… regulation during the IDC by comparing the full transcriptomes of two commonly used …
can then be further exploited to identify regulatory regions contributing to strain adaptation. …

[HTML][HTML] Genetic signals of high-altitude adaptation in amphibians: a comparative transcriptome analysis

W Yang, Y Qi, J Fu - BMC genetics, 2016 - Springer
… , and we included them in our analysis for comparison. The western clawed frog (Xenopus …
A total of 5107 one-to-one orthologs were identified and used in downstream analyses. …

[PDF][PDF] How placenta promotes the successful reproduction in high-altitude populations: a transcriptome comparison between adaptation and acclimatization

D Wu, Y Liu, W Chen, J Shao, P Zhuoma… - Molecular biology …, 2022 - academic.oup.com
… As a key regulator in the hypoxia adaptation of Tibetans, we next analyzed the co-expression
pattern of EPAS1 (also named Hypoxia-Inducible Factor 2 Alpha, HIF2A) and its interacting …

Comparative transcriptome analysis reveals unique genetic adaptations conferring salt tolerance in a xerohalophyte

WW Chai, WY Wang, Q Ma, HJ Yin… - Functional plant …, 2019 - CSIRO Publishing
… We used transcriptome profiling by RNA-seq to compare gene … (KEGG) metabolic pathway
analysis suggested that 50 mM … of an informative comparison of RNA-seq analysis and the …

[HTML][HTML] Comparative analysis of the transcriptome across distant species

MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng… - Nature, 2014 - nature.com
comparison of the transcriptomescomparing divergent model organisms to human to
highlight conserved biological principles (and disentangle them from lineage-specific adaptations). …