[HTML][HTML] Comparative analysis of long noncoding RNA and mRNA expression provides insights into adaptation to hypoxia in Tibetan sheep

F Wang, J Liu, Q Zeng, D Zhuoga - Scientific Reports, 2022 - nature.com
… To explore the potential lncRNAs involved in the adaptation … sheep using comparative
transcriptome analysis between four … Furthermore, we focused on pairwise comparisons between …

Parallel and comparative analysis of the proteome and transcriptome of sorbic acid‐stressed Saccharomyces cerevisiae

H de Nobel, L Lawrie, S Brul, F Klis, M Davis, H Alloush… - Yeast, 2001 - Wiley Online Library
… , adaptation to sorbic acid may involve a compensatory increase in the expression of Tdh1
to counteract any reduction in the rate of glycolysis, which is essential for optimal adaptation

[HTML][HTML] Revealing the gene diversity and candidate gene family for adaption to environment depth in Leucosiid crabs comparing the Transcriptome assembly

YJ Shih, YM Yang, ST Luo, JY Liu - Water, 2023 - mdpi.com
transcriptome assembly and was analyzed as this superfamily is one of the main clades in
brachyuran crabs. Their transcriptome … gene families for depth adaptation were found in eight …

[HTML][HTML] Comparative transcriptome analysis of Rimicaris sp. reveals novel molecular features associated with survival in deep-sea hydrothermal vent

J Zhang, Q Sun, Z Luan, C Lian, L Sun - Scientific reports, 2017 - nature.com
… to adaptation as well. Given the present lack of knowledge with respect to the evolutionary
adaptation … and a clue to the molecular basis of adaptation in Rimicaris sp. and will serve as …

[HTML][HTML] RNA-Seq analysis of salinity stress–responsive transcriptome in the liver of spotted sea bass (Lateolabrax maculatus)

X Zhang, H Wen, H Wang, Y Ren, J Zhao, Y Li - PLoS One, 2017 - journals.plos.org
… In this study, we perform RNA-Seq analysis to identify genes involved in salinity adaptation
… For salinity adaptation study, the comparison of transcriptomic library constructed from the …

Plant adaptation or acclimation to rising CO2? Insight from first multigenerational RNA‐Seq transcriptome

A Watson‐Lazowski, Y Lin, F Miglietta… - Global Change …, 2016 - Wiley Online Library
… (adaptation) were considerably larger (689–853 DE genes). In contrast, population genomic
analysis … Our comparisons were necessarily limited to the expressed portion of the genome …

[HTML][HTML] Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

SME Sahraeian, M Mohiyuddin, R Sebra… - Nature …, 2017 - nature.com
… We measured accuracy by comparing the predicted isoforms against the reference
transcriptome annotation in GENCODE v19 28 . Isoforms missing in the reference were considered …

Gill Transcriptome Analysis Revealed the Difference in Gene Expression Between Freshwater and Seawater Acclimated Guppy (Poecilia reticulata)

X Chen, H Gong, H Chi, B Xu, Z Zheng, Y Bai - Marine Biotechnology, 2021 - Springer
… In this study, RNA-seq analysis was conducted to investigate gill transcriptome profile …
with salinity adaptation. This information would help to understand the adaption in osmotic …

[HTML][HTML] Comparative analysis of alfalfa (Medicago sativa L.) leaf transcriptomes reveals genotype-specific salt tolerance mechanisms

Y Lei, Y Xu, C Hettenhausen, C Lu, G Shen, C Zhang… - BMC plant biology, 2018 - Springer
… status and/or plant adaptation to salt stress most likely arises … Comparing seven alfalfa
cultivars 2 months after 500 mL of … Therefore, ZM and XJ were chosen for comparing their growth …

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species

A Künstner, JBW Wolf, N Backström… - Molecular …, 2010 - Wiley Online Library
analyse the patterns of mutation rate variation and selection intensity across the avian genome,
we performed brain transcriptome … genes in each comparison with zebra finch and one of …