Performance measurement and comparative transcriptome analysis revealed the efforts on hybrid improvement of Qinchuan cattle

C Mei, S Li, SH Abbas, W Tian, H Wang, Y Li… - Animal …, 2019 - Taylor & Francis
analyses showed that breed-specific highly expressed genes and DEGs were closely related
to terms such as development in AQF, and adaption or … when comparing QCF with AQF. …

A Comprehensive Proteomics and Transcriptomics Analysis of Bacillus subtilis Salt Stress Adaptation

H Hahne, U Mäder, A Otto, F Bonn, L Steil… - Journal of …, 2010 - Am Soc Microbiol
… The stringent filtering procedures of the transcriptome and proteome data set resulted in a
… KMC was applied to both the statistically significant transcriptome and proteome data sets in …

Transcriptome and metabolome analyses of two contrasting sesame genotypes reveal the crucial biological pathways involved in rapid adaptive response to salt …

Y Zhang, D Li, R Zhou, X Wang, K Dossa, L Wang… - BMC plant biology, 2019 - Springer
… and metabolites involved in crucial biological pathways may regulate salt tolerance of sesame,
and increase our understanding of the molecular mechanisms underlying the adaptation

Comprehensive analysis of coding and non-coding RNA transcriptomes related to hypoxic adaptation in Tibetan chickens

Y Zhang, W Su, B Zhang, Y Ling, WK Kim… - Journal of Animal …, 2021 - Springer
… Comparative parsing of lncRNAs and mRNAs and functional analysis of differentially
expressed (DE) genes. (a) A comparison of expression between lncRNAs and mRNAs. The box …

Stress‐induced changes in the Arabidopsis thaliana transcriptome analyzed using whole‐genome tiling arrays

G Zeller, SR Henz, CK Widmer… - The Plant …, 2009 - Wiley Online Library
… stresses are accompanied by massive changes in transcriptome composition. To provide a
… Arabidopsis thaliana transcriptome, we have used whole‐genome tiling arrays to analyze the …

Comprehensive analysis of long non-coding RNA and mRNA transcriptomes related to hypoxia adaptation in Tibetan sheep

Z Lu, C Yuan, J Li, T Guo, Y Yue, C Niu… - Frontiers in Veterinary …, 2022 - frontiersin.org
… Interaction network analysis showed that 17 differentially expressed lncRNAs and 15 …
adaptation of Tibetan sheep to hypoxia, laying a foundation for further analysis of the adaptations

Transcriptome analysis reveals fundamental differences in plant response to acute and chronic exposure to ionizing radiation

I Kovalchuk, J Molinier, Y Yao, A Arkhipov… - Mutation Research …, 2007 - Elsevier
… of the chronically exposed plants may represent an adaptation to a milder and constant type
of … The above-mentioned comparison confirms how similar the transcriptomes of A. thaliana …

Transcriptome sequencing (RNA-seq) analysis of the effects of metal nanoparticle exposure on the transcriptome of Chlamydomonas reinhardtii

DF Simon, RF Domingos, C Hauser… - Applied and …, 2013 - Am Soc Microbiol
… Figure 2b allows a more quantitative comparison by showing a cluster analysis and a heat
… at least one transcriptome produced in response to NPs. These initial analyses revealed that …

Comparative transcriptome analysis reveals evolutionary divergence and shared network of cold and salt stress response in diploid D-genome cotton

Y Xu, RO Magwanga, D Jin, X Cai, Y Hou, Z Juyun… - BMC Plant …, 2020 - Springer
… study provided new evidence that gene expression variations of evolution by natural selection
were essential drivers of the morphological variations related to environmental adaptation

Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew

Y Wu, X Ma, Z Pan, SD Kale, Y Song, H King, Q Zhang… - BMC genomics, 2018 - Springer
… or sequence analysis, because (i) our genome/transcriptome … CSEP gene clusters using
PAML in comparison with those of the 3819 … Mycelium and Haustorium transcriptome analyses