Insights into deep‐sea adaptations and host–symbiont interactions: A comparative transcriptome study on Bathymodiolus mussels and their coastal relatives

P Zheng, M Wang, C Li, X Sun, X Wang… - Molecular …, 2017 - Wiley Online Library
… In this work, we screened candidate genes mediating the symbiosis–host interaction by
comparing … transcriptomic analysis provides an outline of the genetic basis for the adaptations of …

An RNA-Seq transcriptome analysis of orthophosphate-deficient white lupin reveals novel insights into phosphorus acclimation in plants

JA O'Rourke, SS Yang, SS Miller, B Bucciarelli… - Plant …, 2013 - academic.oup.com
… White lupin (Lupinus albus) has evolved unique adaptations for growth in P i -deficient
soils, … This global gene expression analysis provides new insights into the biochemical and …

Comparative transcriptome analysis of Saposhnikovia divaricata to reveal drought and rehydration adaption strategies

Y Su, M Jiao, H Guan, Y Zhao, C Deji… - Molecular Biology Reports, 2023 - Springer
… In this study, a comparative transcriptome analysis was firstly conducted to identify the major
Transcriptome analysis identified a total of 89,784 annotated unigenes. The number of …

Comparative time-course transcriptome analysis of two contrasting alfalfa (Medicago sativa L.) genotypes reveals tolerance mechanisms to salt stress

D Ma, J Cai, Q Ma, W Wang, L Zhao, J Li… - Frontiers in Plant …, 2022 - frontiersin.org
… We revealed a dynamic and wide perspective of salt adaptation and tolerance changes at
the transcriptional level through the comparison of DEGs expression in two alfalfa genotypes …

Comparative transcriptomic analyses of citrus cold-resistant vs. sensitive rootstocks might suggest a relevant role of ABA signaling in triggering cold scion adaption

A Primo-Capella, MÁ Forner-Giner… - BMC plant biology, 2022 - Springer
… technology to analyze changes in the transcriptome of Valencia … an a functional enrichment
analysis was performed with the … of the three comparisons were further analyzed (Table 2). …

Comprehensive transcriptome analysis reveals common and specific genes and pathways involved in cold acclimation and cold stress in tea plant leaves

X Hao, B Wang, L Wang, J Zeng, Y Yang, X Wang - Scientia Horticulturae, 2018 - Elsevier
… conditions to investigate the transcriptome changes involved in CA and … Comparing
cold-acclimated plants without further treatment … Moreover, the differences between plant adaption

Comparative analysis of root transcriptome profiles of two pairs of drought-tolerant and susceptible rice near-isogenic lines under different drought stress

A Moumeni, K Satoh, H Kondoh, T Asano, A Hosaka… - BMC plant biology, 2011 - Springer
… to improve the adaptation of rice varieties to … comparison of different NILs for DEGs in
different functional categories is shown in Additional File 4. We also performed cluster analysis of …

Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent

J Zajc, Y Liu, W Dai, Z Yang, J Hu, C Gostinčar… - BMC genomics, 2013 - Springer
… Phylogenomic analysis based on the largest dataset used to date … The analysis also reveals
a significant enrichment in … , and shed more light on adaptations that allow it to thrive in …

Comparative Analysis of the Primary Transcriptome of Synechocystis sp. PCC 6803

M Kopf, S Klähn, I Scholz, JKF Matthiessen… - DNA …, 2014 - academic.oup.com
comparison of promoter sequences and putative regulatory elements impossible. … Leaderless
mRNAs play a role in stress adaptation in E. coli 44 and are more or less restricted to the …

Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi

R Baroncelli, JF Cobo-Díaz, T Benocci, M Peng… - …, 2024 - academic.oup.com
… with the PCW, we performed a transcriptome analysis of 4 reference species, with 2 dicot …
comparisons of transcriptome patterns are plotted in a principal component analysis (Fig. 3A…