Transcriptome profiling of bacterial responses to root exudates identifies genes involved in microbe-plant interactions

GL Mark, JM Dow, PD Kiely… - Proceedings of the …, 2005 - National Acad Sciences
… One limitation of our system is that the transcriptome profiling comparisons are performed
from cultures grown in exudate-supplemented CAA medium. This system was chosen to allow …

Comparative transcriptome analysis revealed the cooperative regulation of sucrose and IAA on adventitious root formation in lotus (Nelumbo nucifera Gaertn)

C Libao, Z Minrong, H Zhubing, L Huiying, L Shuyan - BMC genomics, 2020 - Springer
… IAA transport is involved in the root formation in plant kingdom. Auxin is believe as an
influx carrier to transport IAA from the synthetic organ to the other developmental tissue [43]. A …

Comparative transcriptome profiling of the maize primary, crown and seminal root in response to salinity stress

M Zhang, X Kong, X Xu, C Li, H Tian, Z Ding - PloS one, 2015 - journals.plos.org
… Our transcriptome analysis revealed that 25 TFs were induced or repressed in response to
salt stress, and these genes were identified from 13 different families including C2H2 like zinc …

[HTML][HTML] Transcriptome profiling of Bupleurum chinense DC. root provides new insights into the continuous inflorescence removal induced improvements to root …

H Wang, G Zhang, Z Gao, C Sui, H Ji, J Jiang… - Industrial crops and …, 2021 - Elsevier
… under the CIR treatment, 24 cDNA libraries from the roots of the CK and T groups were
constructed for transcriptome profiling. As shown in Supplementary Table S2, 44.56–61.80 …

Functional genomics by integrated analysis of transcriptome of sweet potato (Ipomoea batatas (L.) Lam.) during root formation

S Kim, H Nie, B Jun, J Kim, J Lee, S Kim, E Kim… - Genes & genomics, 2020 - Springer
… Therefore, in this study, we tried to understand the adventitious root formation process of
sweet potatoes using the transcriptome analysis of 0 day root and 3 days root from cut. …

[HTML][HTML] Root transcriptome and metabolome profiling reveal key phytohormone-related genes and pathways involved clubroot resistance in Brassica rapa L.

X Wei, Y Zhang, Y Zhao, Z Xie, MR Hossain… - Frontiers in Plant …, 2021 - frontiersin.org
… assays and transcriptomic changes using RNA sequencing (RNA-seq) in the roots of resistant
(BrT24) … Based on the combined metabolome profiling and hormone-related transcriptomic

Comparative transcriptome profiling of two tomato genotypes in response to potassium-deficiency stress

X Zhao, Y Liu, X Liu, J Jiang - International Journal of Molecular Sciences, 2018 - mdpi.com
… in the early responses in the transcriptome profiles of K + -… root growth. A lower ratio enables
promotion of bud differentiation, whereas a higher ratio is more conducive for root formation

[HTML][HTML] Transcriptome profiling of Indole-3-Butyric Acid-Induced Adventitious Root Formation in softwood Cuttings of walnut

X Song, R Huang, H Liu, Z Junpei, Y Chang… - Horticultural Plant …, 2024 - Elsevier
… In rejuvenated cuttings, exogenous indole-3-butyric acid (IBA) is essential for AR formation,
… utilized transcriptome sequencing to investigate the mechanism of IBA-induced AR formation

Integrated transcriptome and hormonal analysis of naphthalene acetic acid-induced adventitious root formation of tea cuttings (Camellia sinensis)

Y Wang, D Pang, L Ruan, J Liang, Q Zhang, Y Qian… - BMC Plant …, 2022 - Springer
… The formation of adventitious root (AR) determines the … underlying AR formation in nodal
tea cuttings, transcriptome and … Gene expression profiling during adventitious root formation

Transcriptome Profiling of Louisiana iris Root and Identification of Genes Involved in Lead-Stress Response

S Tian, C Gu, L Liu, X Zhu, Y Zhao… - International Journal of …, 2015 - mdpi.com
… In summary, the root transcriptome of Louisiana iris was first characterized by Illumina
sequencing… The rich genetic and genomic resources in the transcriptomic data lay a foundation for …