Physiological and transcriptomic changes during the early phases of adventitious root formation in mulberry stem hardwood cuttings

C Shang, H Yang, S Ma, Q Shen, L Liu, C Hou… - International Journal of …, 2019 - mdpi.com
… Furthermore, the transcriptomic profiles were investigated to uncover the key molecular
players regulating early AR formation. This study can provide insights into the physiological and …

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

D Sundell, NR Street, M Kumar, EJ Mellerowicz… - The Plant …, 2017 - academic.oup.com
transcriptome studies of cambial growth and wood formation in Populus were limited to specific
wood-forming … The availability of RNA-seq methodologies enables transcriptome profiling

Transcriptome Analysis Reveals the Hormone Signalling Coexpression Pathways Involved in Adventitious Root Formation in Populus

Q Zhang, M Shi, F Tang, N Su, F Jin, Y Pan, L Chu… - Forests, 2023 - mdpi.com
… F-BOX) stimulated AR formation, increased root biomass, and was a … rooting [1]. To gain
molecular insights into the phytohormone signalling pathway in AR formation, a transcriptome

Comparative Root Transcriptome Profiling and Gene Regulatory Network Analysis between Eastern and Western Carrot (Daucus carota L.) Cultivars Reveals …

CC Kulkarni, SS Cholin, AK Bajpai, G Ondrasek… - Plants, 2023 - mdpi.com
… Genes in photosynthesis were variably expressed and substantially enriched during
storage root formation in cultivated orange carrots and repressed in wild carrots in previous …

Transcriptomic analysis reveals ethylene as stimulator and auxin as regulator of adventitious root formation in petunia cuttings

U Druege, P Franken, S Lischewski… - Frontiers in Plant …, 2014 - frontiersin.org
… Following AR formation from 2 to 192 hours post-excision (hpe) of cuttings, transcriptome
analysis by microarray revealed a change of the character of the rooting zone from SB to root

The root transcriptome of Achyranthes bidentata and the identification of the genes involved in the replanting benefit

YH Yang, MJ Li, YJ Yi, RF Li, C Dong, ZY Zhang - Plant cell reports, 2018 - Springer
… The transcriptome profiling in replanting roots revealed that expression pattern changes of
… In the normal progression of root formation and development, lignin levels in cambium cells …

Elucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling

P Juntawong, A Sirikhachornkit, R Pimjan… - Frontiers in Plant …, 2014 - frontiersin.org
… Here, we profiled transcriptome changes in Jatropha roots … Bioinformatic analysis of
transcriptome data was performed to … analyzed waterlogging transcriptomes from Arabidopsis, …

Transcriptome profile analysis reveals the ontogenesis of rooted chichi in Ginkgo biloba L.

X Liu, L Sun, Q Wu, X Men, L Yao, S Xing - Gene, 2018 - Elsevier
… biloba chichi, we used RNA-seq to analyse the transcriptome profile of rooted chichi at two
… were closely correlated with transcriptome data. The transcriptome resources generated in …

Comparative transcriptome analysis provides key insights into gene expression pattern during the formation of nodule-like structures in Brachypodium

J Thomas, MJ Bowman, A Vega, HR Kim… - Functional & integrative …, 2018 - Springer
… the transcriptomic profile of Brachypodium roots with rice roots during NLS formation and …
Since, lateral root formation is diminished in roots containing NLS, it is possible that gene …

Comparative transcriptome profiling to unravel the key molecular signalling pathways and drought adaptive plasticity in shoot borne root system of sugarcane

R Valarmathi, HK Mahadeva Swamy, C Appunu… - Scientific Reports, 2023 - nature.com
root system comprises of superficial sett roots as well as deeply-penetrating shoot borne
roots (SBR) with latter being the permanent root … and whole transcriptome profiling, conducted …