[HTML][HTML] High-throughput single-cell transcriptome profiling of plant cell types

CN Shulse, BJ Cole, D Ciobanu, J Lin, Y Yoshinaga… - Cell reports, 2019 - cell.com
transcriptomes for 12,198 individual root cells, … roots can lead to changes in gene expression,
we confirmed that Drop-seq captured a representative population of cells present in the root

[HTML][HTML] Gene expression profiling reveals the effects of light on adventitious root formation in lotus seedlings (Nelumbo nucifera Gaertn.)

C Libao, H Yuyan, Z Minrong, X Xiaoyong, S Zhiguang… - BMC genomics, 2020 - Springer
… To dissect the underlying mechanism by which light regulates AR development, we
comparatively analyzed the transcriptome profile of lotus before and after exposure to various light …

Exogenous phytohormone application and transcriptome analysis provides insights for adventitious root formation in Taxus cuspidata S. et Z

K Cai, D Zhang, X Li, Q Zhang, L Jiang, Y Li… - Plant Growth …, 2023 - Springer
… The transcriptomic profiles were investigated to identify key genes and regulatory networks
related to AR development during the cutting’s propagation. This study provides insights into …

[HTML][HTML] Transcriptome Analysis of Early Lateral Root Formation in Tomato

A Zhang, Q Shang - Plants, 2024 - mdpi.com
… To elucidate gene expression networks during LR formation, we collected samples of … for
transcriptome analysis. In this study, we divided the tomato root system into three equal root

Arabidopsiswhole-transcriptome profiling defines the features of coordinated regulations that occur during secondary growth

JH Ko, KH Han - Plant molecular biology, 2004 - Springer
… The transcriptome profiling revealed the transcription phenotypes that are characteristic to
different stem developmental stages and confirmed various existing insights. Furthermore, we …

Comprehensive transcriptome profiling and phenotyping of rootstock and scion in a tomato/potato heterografting system

G Zhang, Z Mao, Q Wang, J Song, X Nie… - Physiologia …, 2019 - Wiley Online Library
… To investigate the phenotypic and transcriptomic responses … phenotyping and transcriptome
profiling were performed. … This work provides abundant transcriptome profile data and …

[PDF][PDF] Transcriptome analysis of the effect of cutting age on adventitious root formation of populus

Z Tian, H Hong, X Kang, X Wang, H Xue - Bot Res, 2019 - pdf.hanspub.org
… Finally, the relationship between adventitious root formation with 5 down-regulated genes …
The transcriptome analysis showed that the expression profiles of adventitious root formation

[HTML][HTML] … (Ipomoea batatas) roots indicates down-regulation of lignin biosynthesis and up-regulation of starch biosynthesis at an early stage of storage root formation

N Firon, D LaBonte, A Villordon, Y Kfir, J Solis, E Lapis… - BMC genomics, 2013 - Springer
… The aim of the present study was to identify the molecular mechanisms involved in the
initiation of storage root formation, by performing a detailed transcriptomic analysis of initiating …

[HTML][HTML] Transcriptome Profiling of Radish (Raphanus sativus L.) Root and Identification of Genes Involved in Response to Lead (Pb) Stress with Next Generation …

Y Wang, L Xu, Y Chen, H Shen, Y Gong, C Limera… - Plos one, 2013 - journals.plos.org
transcriptome sequencing and assembly, a total of 68,940 assembled transcripts including
33,337 unigenes were obtained from two radish root … gene pool for radish root studies. The …

Genome-wide transcriptome profiling provides insights into the responses of maize (Zea mays L.) to diazotrophic bacteria

PR Hardoim, TLG de Carvalho, HGF Ballesteros… - Plant and Soil, 2020 - Springer
Transcriptome profiling revealed a total of 764 and 3595 differentially expressed genes (DEGs)
in maize when exclusively associated with A. brasilense and H. seropedicae, …