[HTML][HTML] Pharmacometrics in tuberculosis: progress and opportunities

JJ Wilkins, EM Svensson, JP Ernest, RM Savic… - … of Antimicrobial Agents, 2022 - Elsevier
TB drug development and to further optimize treatment, particularly with respect to dose–exposure–response
and treatment … of pharmacometrics on the treatment of TB, and future …

Both pharmacokinetic variability and granuloma heterogeneity impact the ability of the first-line antibiotics to sterilize tuberculosis granulomas

JM Cicchese, V Dartois, DE Kirschner… - Frontiers in …, 2020 - frontiersin.org
… We use our next-generation multi-scale computational model … We focus on treatment with
the standard regimen for TB of … We have devised a pipeline for incorporating these factors into …

Tools to develop antibiotic combinations that target drug tolerance in Mycobacterium tuberculosis

T Greenstein, BB Aldridge - Frontiers in Cellular and Infection …, 2023 - frontiersin.org
… As new tools to study drug combinations earlier in the drug development pipeline are being
… integrated with GranSim, a multi-scale model of tuberculosis granuloma formation. GranSim …

[HTML][HTML] Integrative analysis of multimodal patient data identifies personalized predictors of tuberculosis treatment prognosis

A Sambarey, K Smith, C Chung, HS Arora, Z Yang… - Iscience, 2024 - cell.com
… domain information from 5,060 TB patients spanning 10 countries with high burden of MDR-TB
from the NIAID TB Portals database to determine predictors of TB treatment outcome. Our …

Mycobacterial genomics and structural bioinformatics: opportunities and challenges in drug discovery

VP Waman, SC Vedithi, SE Thomas… - Emerging microbes & …, 2019 - Taylor & Francis
… many first-line antimicrobials, including all the current TB drugs. The acquired resistance to
… These models are generated through a homology modelling pipeline. Development of such …

Proton to proteome, a multi-scale investigation of drug discovery

JA Fine - 2020 - search.proquest.com
… To fill this gap, we propose a new pipeline which combines traditional Computer Aided
Drug Design (CADD) techniques with in vitro validation and machine learning to ra- tionally …

[HTML][HTML] Integrative analysis of clinical health records, imaging and pathogen genomics identifies personalized predictors of disease prognosis in tuberculosis

A Sambarey, K Smith, C Chung, HS Arora, Z Yang… - medRxiv, 2022 - ncbi.nlm.nih.gov
… clinical data from drug-sensitive pulmonary TB, MDR TB and XDR TB patients across …
patient, drug, and pathogen features with the type of drug resistance and prognosis of treatment in …

Protein Integrated Network Analysis to Reveal Potential Drug Targets Against Extended Drug-Resistant Mycobacterium tuberculosis XDR1219

NUA Zahra, F Jamil, R Uddin - Molecular Biotechnology, 2021 - Springer
… The pipeline adopted the combination of an extensive integrated network … of these drugs
are approved as a part of available TB treatment regimen [6]. The development of new treatment

Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support

P Bhattacharya, J Chen, S Hoops… - … Journal of High …, 2023 - journals.sagepub.com
… Our models are multi-scale, multi-theory agent-based models. They include social contact
networks at various spatial and temporal scales, and multi-theory behavior expressed at …

Enabling rapid COVID-19 small molecule drug design through scalable deep learning of generative models

SA Jacobs, T Moon, K McLoughlin… - … Journal of High …, 2021 - journals.sagepub.com
… (ATOM) Consortium and created the ATOM Modeling Pipeline (AMPL), a framework for …
’s Center for Accelerated Drug Discovery. Her research uses cutting-edge, multi-scale, in silico …