Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis

E Kraft, SL Stone, L Ma, N Su, Y Gao, OS Lau… - Plant …, 2005 - academic.oup.com
ubiquitin E2 enzymes by both bioinformatics and activity assays. To further define … function
of Arabidopsis ubiquitin E2 enzymes, we examined E2-E3 specificity in in vitro ubiquitination

[HTML][HTML] … based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes

A Ramadan, K Nemoto, M Seki, K Shinozaki… - BMC plant biology, 2015 - Springer
… to function as Ub E3 ligases and the wheat germ extract contains endogenous E1, E2, and
Ub, we hypothesized that these smears and high molecular mass forms result from Ub ligase

Functional Analysis of the RING-Type Ubiquitin Ligase Family of Arabidopsis

SL Stone, H Hauksdóttir, A Troy, J Herschleb… - Plant …, 2005 - academic.oup.com
… by the ubiquitin ligase or E3 enzyme. Uniquely, E3 ligases of the HECT domain class form
a ubiquitin thioester prior to transfer to the substrate, whereas all the other ligases interact …

Ubiquitin ligases: structure, function, and regulation

N Zheng, N Shabek - Annual review of biochemistry, 2017 - annualreviews.org
… At the end of a three-enzyme cascade, ubiquitin ligases … in structure–function studies of
ubiquitin ligases as well as exciting … Our increased understanding of ubiquitin ligase function and …

Molecular cloning and functional characterisation of the tomato E3 ubiquitin ligase SlBAH1 gene

SM Zhou, SH Wang, C Lin, YZ Song… - Functional Plant …, 2016 - CSIRO Publishing
… Our results showed that the fusion protein SlBAH1 possesses E3 ubiquitin ligase enzyme
activity and that the RING domain in SlBAH1 is essential for this activity. SlBAH1-silencing in …

[HTML][HTML] A genomic and functional inventory of deubiquitinating enzymes

SMB Nijman, MPA Luna-Vargas, A Velds… - Cell, 2005 - cell.com
… As the number of Ub E3 ligases (the third factor in the ubiquitination cascade that determines
target specificity) increased during evolution, so did the number of USPs, suggesting an …

[HTML][HTML] Interactions between the quality control ubiquitin ligase CHIP and ubiquitin conjugating enzymes

Z Xu, E Kohli, KI Devlin, M Bold, JC Nix, S Misra - BMC structural biology, 2008 - Springer
… dictates the type and biological consequence of ubiquitination, it is important to understand
the basis of specificity in E2:E3 interactions. The E3 ligase CHIP interacts with Hsp70 and …

Characterization of E3Histone, a Novel Testis Ubiquitin Protein Ligase Which Ubiquitinates Histones

Z Liu, R Oughtred, SS Wing - Molecular and cellular biology, 2005 - Taylor & Francis
… of this pathway, a ubiquitin-conjugating enzyme (E2), and the activated form is maintained …
of the E2 enzyme. The third enzyme in the process, the ubiquitin protein ligase (E3), supports …

A ubiquitin ligase transfers preformed polyubiquitin chains from a conjugating enzyme to a substrate

W Li, D Tu, AT Brunger, Y Ye - Nature, 2007 - nature.com
… are not required for its polyubiquitination function, we used its carboxy-… characterization of
these reactions may reveal additional examples of thiol-linked ubiquitin chains on E2 enzymes

Systematic characterization of deubiquitylating enzymes for roles in maintaining genome integrity

R Nishi, P Wijnhoven, C Le Sage, J Tjeertes… - Nature cell …, 2014 - nature.com
enzymes (DUBs) function in DSB responses. Here, by carrying out a multidimensional
screening strategy for human DUBs, we identify several with hitherto unknown links to DSB repair, …