[HTML][HTML] Unraveling genomic regions and candidate genes for multiple disease resistance in upland cotton using meta-QTL analysis

WQ Huo, ZQ Zhang, ZY Ren, JJ Zhao, CX Song… - Heliyon, 2023 - cell.com
… a consensus linkage map based on the genetic map of upland cotton. Our results can be
used for cotton molecular breeding and screening of multiple resistance genes in cotton. …

Whole genome sequencing of a MAGIC population identified genomic loci and candidate genes for major fiber quality traits in upland cotton (Gossypium hirsutum L.)

GN Thyssen, JN Jenkins, JC McCarty, L Zeng… - … and Applied Genetics, 2019 - Springer
… The concordance of some of our candidate genes with independent studies is encouraging
for the utility of our full list of candidates in breeding and biotechnological applications. …

A genome-wide association study revealed key SNPs/genes associated with salinity stress tolerance in upland cotton

M Yasir, S He, G Sun, X Geng, Z Pan, W Gong, Y Jia… - Genes, 2019 - mdpi.com
… In this study, a core collection of 419 genotypes of upland cotton was used, derived from a
… 15 candidate genes surrounding the RWC_150 peak signal, whereas 5 candidate genes

Genome-wide association study of fiber yield-related traits uncovers the novel genomic regions and candidate genes in Indian upland cotton (Gossypium hirsutum L.)

B Joshi, S Singh, GJ Tiwari, H Kumar… - Frontiers in Plant …, 2023 - frontiersin.org
… variability within the upland cotton germplasm released from different cotton growing belts
… through expressional profiling of putative candidate genes found within the genomic regions …

Genome-Wide Association Studies Reveal Genetic Variation and Candidate Genes of Drought Stress Related Traits in Cotton (Gossypium hirsutum L.)

S Hou, G Zhu, Y Li, W Li, J Fu, E Niu, L Li… - Frontiers in Plant …, 2018 - frontiersin.org
candidate genes significantly associated with cotton drought response, we deployed GWAS
of drought stress through integrating the genotypic data of upland cottoncandidate genes

QTL and candidate gene identification of the node of the first fruiting branch (NFFB) by QTL-seq in upland cotton (Gossypium hirsutum L.)

J Zhang, X Jia, X Guo, H Wei, M Zhang, A Wu, S Cheng… - BMC genomics, 2021 - Springer
… and candidate genes related to the NFFB in cotton using a BC 4 F 2 population. Two major
QTLs for the NFFB were detected by QTL-seq and colocalization, and two candidate genes

Homology-based identification of candidate genes for male sterility editing in upland cotton (Gossypium hirsutum L.)

KY Morales, AH Bridgeland, KD Hake… - Frontiers in Plant …, 2022 - frontiersin.org
… potential candidate genes within the upland cotton genome … to be used in hybrid cotton
breeding. Combining homology-… GMS genes that previously had no diversity observed in cotton

Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

D Liu, J Zhang, X Liu, W Wang, D Liu, Z Teng, X Fang… - BMC genomics, 2016 - Springer
… In further studies, we will clone these candidate genes from the genome and cDNA and
investigate the relationship between candidate genes and fiber quality traits through transgenic …

Fine-mapping and candidate gene analysis of qFL-c10-1 controlling fiber length in upland cotton (Gossypium hirsutum L.)

R Zhang, C Shen, D Zhu, Y Le, N Wang, Y Li… - … and Applied Genetics, 2022 - Springer
… protein to be a promising candidate gene for qFS07.1. … candidate genes. Obviously, these
findings are not enough to support our knowledge of the molecular basis determining cotton

Fine mapping and identification of candidate genes for a QTL affecting Meloidogyne incognita reproduction in Upland cotton

P Kumar, Y He, R Singh, RF Davis, H Guo… - BMC genomics, 2016 - Springer
… qMi-C14 locus and evaluated the genetic effects of this QTL on RKN … raimondii, we identified
20 candidate genes encoding … coding regions of candidate genes, and these four genes are …