Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.)

C Li, Y Fu, R Sun, Y Wang, Q Wang - Frontiers in plant science, 2018 - frontiersin.org
… distance of the Upland cotton population used in this study, the regions within 400-kb on
either side of the nine QTNs were used for the further identification of candidate genes. The LD …

A high-density genetic map and multiple environmental tests reveal novel quantitative trait loci and candidate genes for fibre quality and yield in cotton

Q Gu, H Ke, Z Liu, X Lv, Z Sun, M Zhang… - … and Applied Genetics, 2020 - Springer
… from an intraspecific cross between the upland cotton cv. Nongdamian13, which exhibits …
, and seven previously unreported candidate genes with significantly differential expression …

Genome-wide association study reveals the genetic control underlying node of the first fruiting branch and its height in upland cotton (Gossypium hirsutum L.)

Y Fu, C Dong, J Wang, Y Wang, C Li - Euphytica, 2019 - Springer
… Although some candidate genes were identified in this study and one gene, Gh_A05G1482,
… in cotton, an analysis, including candidate gene association mapping and gene expression …

Identification of candidate genes for early maturity traits by combining BSA-seq and QTL mapping in upland cotton (Gossypium hirsutum L.)

L Ma, T Hu, M Kang, X Fu, P Chen, F Wei, H Jian… - Journal of Integrative …, 2024 - Elsevier
… cultivated fields between grains and cotton in China. In the present study, we aimed to find
upland cotton quantitative trait loci (QTLs) and candidate genes related to early maturity traits, …

Transcriptome analysis and identification of genes associated with oil accumulation in upland cotton

J Song, W Pei, N Wang, J Ma, Y Xin… - Physiologia …, 2022 - Wiley Online Library
… transcriptome sequencing to compare the differences in gene expression and identify
candidate genes during ovule development of high-oil and low-oil materials in G. hirsutum. …

Identification of candidate genes for fiber length quantitative trait loci through RNA-Seq and linkage and physical mapping in cotton

X Li, M Wu, G Liu, W Pei, H Zhai, J Yu, J Zhang, S Yu - BMC genomics, 2017 - Springer
… As a result, we identified 703 SNPs (about 1% of total number of genes predicted in Upland
cotton) in 339 of the 1551 DEGs between the two BILs (Additional file 4: Table S4). Among …

GhNAC12, a neutral candidate gene, leads to early aging in cotton (Gossypium hirsutum L)

F Zhao, J Ma, L Li, S Fan, Y Guo, M Song, H Wei… - Gene, 2016 - Elsevier
… Our findings suggest that GhNAC12 is a candidate gene for early aging in upland cotton
cultivars… no selection pressure imposed on GhNAC12 during the domestication of upland cotton. …

Mapping by sequencing in cotton (Gossypium hirsutum) line MD52ne identified candidate genes for fiber strength and its related quality attributes

MS Islam, L Zeng, GN Thyssen, CD Delhom… - … and Applied Genetics, 2016 - Springer
… -like kinase pathway genes are likely candidates for superior fiber strength … candidate
genes for the QTLs that control complex traits in a complex genome like tetraploid upland cotton

Two genomic regions associated with fiber quality traits in Chinese upland cotton under apparent breeding selection

J Su, L Li, C Pang, H Wei, C Wang, M Song, H Wang… - Scientific reports, 2016 - nature.com
… Two major genomic regions (MGR1 and MGR2) on chromosome D t 7 and candidate genes
potentially underlying FL and FS To identify putative candidate genes in the neighboring …

Genome-wide association study reveals novel genes on different chromosomal positions regulating boll weight in upland cotton (Gossypium hirsutum L.)

Z Iqbal, MS Iqbal, S Alamery, K Shehzad… - Genetic Resources and …, 2024 - Springer
… and candidate genes could prove to have potential for influencing BW development in upland
cotton. … research focused on the exploitation of BW for accelerated cotton improvement. …