Evolution, mode of transmission, and mutational landscape of newly emerging SARS-CoV-2 variants

C Chakraborty, AR Sharma, M Bhattacharya… - Mbio, 2021 - Am Soc Microbiol
… , we critically evaluated the mutational landscape of all of the … the efficacy of vaccines against
the new SARS-CoV-2 variants. Our … variant names as keywords: “B.1.526 variant,” “B.1.525 …

The global landscape of SARS-CoV-2 genomes, variants, and haplotypes in 2019nCoVR

S Song, L Ma, D Zou, D Tian, C Li, J Zhu… - Genomics …, 2020 - academic.oup.com
… To facilitate free public access to all genome assemblies and help worldwide researchers
better understand the variation and transmission of SARS-CoV-2, we perform daily updates for …

The genomic variation landscape of globally-circulating clades of SARS-CoV-2 defines a genetic barcoding scheme

Q Guan, M Sadykov, R Nugmanova, MJ Carr, ST Arold… - biorxiv, 2020 - biorxiv.org
… investigated the genomic variation landscape of a large set of globally-derived SARS-CoV-2 …
in the spike protein that may modulate the interaction between SARS-CoV-2 and the host. …

Global landscape of SARS-CoV-2 genomic surveillance and data sharing

Z Chen, AS Azman, X Chen, J Zou, Y Tian, R Sun… - Nature …, 2022 - nature.com
… of genomic data of SARS-CoV-2 variants, we extracted country-specific, variant-specific
and time-specific aggregated data on the number of SARS-CoV-2 variant cases from official …

The mutational landscape of SARS-CoV-2

B Saldivar-Espinoza, P Garcia-Segura… - International Journal of …, 2023 - mdpi.com
… force behind the evolution of SARS-CoV-2. Not all SARS-CoV-2 genes have mutated in
the same way. Fewer non-synonymous single nucleotide variations are found in genes that …

Landscape analysis of escape variants identifies SARS-CoV-2 spike mutations that attenuate monoclonal and serum antibody neutralization

Z Liu, LA VanBlargan, LM Bloyet, PW Rothlauf… - BioRxiv, 2020 - biorxiv.org
… the immune-selected mutational landscape in S protein, we used a VSV-eGFP-SARS-CoV-2-S …
-mediated mutational landscape in S with sequence variation in circulating SARS-CoV-2, …

Genomic landscape of alpha-variant of SARS-CoV-2 circulated in Pakistan

N Fiaz, I Zahoor, S Saima, A Basheer - Plos one, 2022 - journals.plos.org
In this study, we investigated the genomic variability of alpha-VOC of SARS-CoV-2 in Pakistan,
in context of the global population of this variant. A set of 461 whole-genome sequences …

Emerging landscape of SARS-CoV-2 variants and detection technologies

X Li, J Wang, J Geng, L Xiao, H Wang - Molecular Diagnosis & Therapy, 2023 - Springer
… Like all RNA viruses, severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2)
evolves over time through random mutation resulting in genetic variations in the population. …

The puzzling mutational landscape of the SARS‐2‐variant Omicron

J Fantini, N Yahi, P Colson, H Chahinian… - Journal of medical …, 2022 - Wiley Online Library
variant, we applied to this variant the analysis of the T-index (transmissibility index) which
had allowed us, soon after the appearance of the delta variant … very first steps of SARS-CoV-2 …

The evolving faces of the SARS-CoV-2 genome

M Schmidt, M Arshad, SH Bernhart, S Hakobyan… - Viruses, 2021 - mdpi.com
… a highly resolved mutational landscape showing the distribution of SNVs across the SARS-…
by high vaccination coverage combined with SARS-CoV-2 variant control to avoid vaccine-…