… for predicted functions related to DNA/RNA metabolism compared with the percentage of
genes with such functions in the whole genome. In addition, extensive gene family …

… across all angiosperms. Here, we leverage genomic resources from 43 angiosperm species
… non-model taxa across the diversity of angiosperms. By taking an anchored phylogenomics …

… Genomic comparisons between A. fimbriata and other angiosperms facilitated the identification
of ancient genomic … to monocots, whereas phylogenetic inferences based on sequence …

… Based on the manufacturer’s instructions, the whole genomic DNA was extracted from 5 g
of fresh leaves with DNeasy Plant Mini Kit (QIAGEN, CA, USA). After DNA was purified, 5 mg …

… Angiosperm phylogeny has been investigated extensively … successful in reconstructing
angiosperm phylogenies at family … whole genome duplication make it a major challenge to build …

… Phylogeny and species of green plants and angiosperms. (A) The tree of the plant life …
the protein and CDS without the whole genome. Jbrowse could provide genetic information …

… The lack of genomic data limits our understanding of biodiversity in … of angiosperms (Table
1). Our study's main goals were to 1) assess whole plastomes' power to resolve phylogenetic …

… Whole-genome duplication To estimate the phylogenetic placement of whole-genome
duplications, we used PUG version 2.1 (github.com/mrmckain/PUG) to query putative paralogs …

… Here, we investigate WGDs in the large and diverse angiosperm order Malpighiales,
which … similarity and species phylogeny. We first constructed whole genome/transcriptome …

… Phylogenetic analyses based on complete plastid genome … plastid genome sequences to
build a phylogenetic framework for Viridiplantae that reflects the wealth of new plastid genome …