Draft genome sequence of the yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460

X Liu, RS Kaas, PR Jensen, M Workman - 2012 - Am Soc Microbiol
… Furthermore, 13 full-length coding sequences were PCR amplified and resequenced to
estimate accuracy. The total resequenced length was 21,111 bp, with 100% similarity obtained. …

Deletion of type I glutamine synthetase deregulates nitrogen metabolism and increases ethanol production in Clostridium thermocellum

T Rydzak, D Garcia, DM Stevenson, M Sladek… - Metabolic …, 2017 - Elsevier
… using Saccharomyces cerevisiae or Zymomonas mobilis. While these organisms are …
Genome resequencing and analysis was performed by the DOE Joint Genome Institute (JGI…

Applications of systems biology towards microbial fuel production

CM Gowen, SS Fong - Trends in microbiology, 2011 - cell.com
… As another example, the ethanologen Zymomonas mobilis is naturally highly optimized
for ethanol production, reaching near theoretical yields. Recent genomic, transcriptomic and …

Engineering of Klebsiella oxytoca for the Production of 2,3-Butanediol from High Concentration of Xylose

JW Cha, SH Jang, J Son, J Kim, I Jung… - ACS Sustainable …, 2021 - ACS Publications
… Through whole genome resequencing, it was revealed that a mutation in OmpR (a … coli,
Enterobacter aerogenes, and Zymomonas mobilis has been reported for industrial production. (3…

The ethanol pathway from Thermoanaerobacterium saccharolyticum improves ethanol production in Clostridium thermocellum

S Hon, DG Olson, EK Holwerda, AA Lanahan… - Metabolic …, 2017 - Elsevier
… ethanol producing organisms such as Saccharomyces cerevisiae and Zymomonas mobilis.
genome resequencing of strains was performed by the Department of Energy Joint Genome

Identification of functional butanol-tolerant genes from Escherichia coli mutants derived from error-prone PCR-based whole-genome shuffling

X He, T Xue, Y Ma, J Zhang, Z Wang, J Hong… - Biotechnology for …, 2019 - Springer
… The mutation sites of the two strains were then identified by whole-genome resequencing,
and comparative functional genomic analysis was performed to identify the key butanol-…

Improvement of sabinene tolerance of Escherichia coli using adaptive laboratory evolution and omics technologies

T Wu, J Liu, M Li, G Zhang, L Liu, X Li, X Men… - Biotechnology for …, 2020 - Springer
… IPA tolerance were identified through genome resequencing [25]. … were identified through
genome resequencing, transcriptomics, … Then, whole genome resequencing and transcriptome …

Microorganisms and Genetic Improvement for First and Second Generation Bioethanol Production

GV de Melo Pereira, B Leal Maske… - Liquid Biofuels …, 2022 - Springer
… , or even bacterial strains of Zymomonas mobilis, Thermoanaerobacterium saccharolyticum,
and … sequences of previously sequenced genome, a process known as re-sequencing; or (ii) …

Adaptive mutation related to cellulose producibility in Komagataeibacter medellinensis (Gluconacetobacter xylinus) NBRC 3288

M Matsutani, K Ito, Y Azuma, H Ogino, M Shirai… - Applied microbiology …, 2015 - Springer
… In addition, since recently the whole genome re-sequencing using a high throughput next-…
of Azotobacter vinelandii (γ-proteobacteria) and Zymomonas mobilis (α-proteobacteria). Data …

Adaptive laboratory evolution reveals the selenium efflux process to improve selenium tolerance mediated by the membrane sulfite pump in Saccharomyces …

A Gong, W Liu, Y Lin, L Huang, Z Xie - Microbiology Spectrum, 2023 - Am Soc Microbiol
… Combined with whole-genome resequencing, ALE helps investigate the links between the
… We found that mutations in the sulfite efflux pump gene ssu1 and its transcription factor gene