[HTML][HTML] A pangenome-guided manually curated library of transposable elements for Zymoseptoria tritici
… High-quality species-specific transposable element (TE) libraries are required for studies to
… observed in the fungal wheat pathogen Zymoseptoria tritici, we produced a manually curated …
… observed in the fungal wheat pathogen Zymoseptoria tritici, we produced a manually curated …
Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defenses
… Here, we describe how TEs have shaped genome evolution of the fungal wheat pathogen
Zymoseptoria tritici and four closely related species. We compared de novo TE annotations …
Zymoseptoria tritici and four closely related species. We compared de novo TE annotations …
[HTML][HTML] Heterochromatin in the fungal plant pathogen, Zymoseptoria tritici: Control of transposable elements, genome plasticity and virulence
CJ Fraser, SK Whitehall - Frontiers in Genetics, 2022 - frontiersin.org
… of the genome that are enriched with transposable elements. It has been proposed that the
… Here we discuss this model in the context of the key wheat pathogen, Zymoseptoria tritici. …
… Here we discuss this model in the context of the key wheat pathogen, Zymoseptoria tritici. …
The identification of a transposon affecting the asexual reproduction of the wheat pathogen Zymoseptoria tritici
… Zymoseptoria tritici is the causal agent of Septoria tritici blotch (… transposable element (TE)
consisting of four genes. The functional roles of the REP9-2 to REP9-4 genes in this element …
consisting of four genes. The functional roles of the REP9-2 to REP9-4 genes in this element …
[HTML][HTML] Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome
C Plissonneau, FE Hartmann, D Croll - BMC biology, 2018 - Springer
… In the IPO323 genome, singleton genes were closest to transposable elements followed by
… to prevent transposable element proliferation, regions rich in transposable elements can be …
… to prevent transposable element proliferation, regions rich in transposable elements can be …
Recent reactivation of a pathogenicity-associated transposable element is associated with major chromosomal rearrangements in a fungal wheat pathogen
… element across five species that last diverged ∼11 000 years ago. We show that the element
likely originated in the Zymoseptoria … of the wheat pathogen Zymoseptoria tritici, we assess …
likely originated in the Zymoseptoria … of the wheat pathogen Zymoseptoria tritici, we assess …
[HTML][HTML] A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici
… De novo transposon annotation of the 19 complete genomes shows that the highly diverse
… with transposable element content. Furthermore, transposable element expansions likely …
… with transposable element content. Furthermore, transposable element expansions likely …
Forward Genetics Approach Reveals Host Genotype-Dependent Importance of Accessory Chromosomes in the Fungal Wheat Pathogen Zymoseptoria tritici
M Habig, J Quade, EH Stukenbrock - MBio, 2017 - Am Soc Microbiol
… transposable elements (1). Recently, we were able to show that the telomeres, subtelomeric
regions, and centromeres do not differ between accessory and core chromosomes and yet …
regions, and centromeres do not differ between accessory and core chromosomes and yet …
Meiosis Leads to Pervasive Copy-Number Variation and Distorted Inheritance of Accessory Chromosomes of the Wheat Pathogen Zymoseptoria tritici
S Fouché, C Plissonneau… - Genome biology and …, 2018 - academic.oup.com
… Synteny breakpoints are commonly associated with repetitive sequences or transposable
element clusters that can misalign during recombination, thereby generating length …
element clusters that can misalign during recombination, thereby generating length …
[HTML][HTML] Transposable element insertions shape gene regulation and melanin production in a fungal pathogen of wheat
P Krishnan, L Meile, C Plissonneau, X Ma… - BMC biology, 2018 - Springer
… Zymoseptoria tritici. We show that differences in melanin levels between two strains of Z. tritici
… and (2) an insertion of transposable elements upstream of the Zmr1 promoter. Remarkably…
… and (2) an insertion of transposable elements upstream of the Zmr1 promoter. Remarkably…
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