[HTML][HTML] Transposable element insertions shape gene regulation and melanin production in a fungal pathogen of wheat
P Krishnan, L Meile, C Plissonneau, X Ma… - BMC biology, 2018 - Springer
… Zymoseptoria tritici. We show that differences in melanin levels between two strains of Z. tritici
… and (2) an insertion of transposable elements upstream of the Zmr1 promoter. Remarkably…
… and (2) an insertion of transposable elements upstream of the Zmr1 promoter. Remarkably…
[HTML][HTML] Rapid sequence evolution driven by transposable elements at a virulence locus in a fungal wheat pathogen
… Here, we performed genome-wide association studies (GWAS) on a highly polymorphic
mapping population of 120 isolates of Zymoseptoria tritici, the most damaging pathogen of …
mapping population of 120 isolates of Zymoseptoria tritici, the most damaging pathogen of …
Species of Zymoseptoria (Dothideomycetes) as a Model System to Study Plant Pathogen Genome Evolution
IC Rojas Barrera, WC Fagundes… - … : Fungal-Plant Interactions, 2022 - Springer
… Zymoseptoria tritici. Natural grasslands in the Middle East are a hotspot of diversity for …
tritici supports local adaptation processes via positive selection and transposable element …
tritici supports local adaptation processes via positive selection and transposable element …
Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs
R Kellner, A Bhattacharyya, S Poppe… - Genome biology and …, 2014 - academic.oup.com
… upstream and downstream flanking regions of each transcript, and 3) transposable elements.
Transposable element predictions relied on modified parameters of Goodwin et al. (2011) (…
Transposable element predictions relied on modified parameters of Goodwin et al. (2011) (…
Recent reactivation of a pathogenicity-associated transposable element triggers major chromosomal rearrangements in a fungal wheat pathogen
… In this work, we identify the factors driving the invasion of a highly active transposon in the
fungal pathogen Zymoseptoria tritici. The pathogen attacks wheat and causes global losses in …
fungal pathogen Zymoseptoria tritici. The pathogen attacks wheat and causes global losses in …
[HTML][HTML] Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria
… The wheat pathogen Zymoseptoria tritici with its highly … tritici high-quality chromosome
assemblies revealed the occurrence of “orphan regions” enriched with transposable elements …
assemblies revealed the occurrence of “orphan regions” enriched with transposable elements …
… Genomics of Four Fungal Grass Pathogens in the Genus Zymoseptoria Identify Novel Orphan Genes and Species-Specific Invasions of Transposable Elements
J Grandaubert, A Bhattacharyya… - G3: Genes, Genomes …, 2015 - academic.oup.com
… few families of transposable elements are shared between Zymoseptoria species while …
Transposable elements (TEs) characteristics along the 21 chromosomes of Zymoseptoria tritici…
Transposable elements (TEs) characteristics along the 21 chromosomes of Zymoseptoria tritici…
[HTML][HTML] A highly multiplexed assay to monitor pathogenicity, fungicide resistance and gene flow in the fungal wheat pathogen Zymoseptoria tritici
H Bellah, G Gazeau, S Gélisse, R Amezrou, TC Marcel… - Plos one, 2023 - journals.plos.org
… The genotyping of transposable element insertions in the MFS1 promoter region was not …
a clear assignment of amplicons to transposable element insertion genotypes, but our data …
a clear assignment of amplicons to transposable element insertion genotypes, but our data …
[HTML][HTML] Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen
U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
… Here, we analyzed a set of 19 telomere-to-telomere genomes of the fungal wheat pathogen
Zymoseptoria tritici. Phylogenetic reconstruction and ancestral state estimates of individual …
Zymoseptoria tritici. Phylogenetic reconstruction and ancestral state estimates of individual …
Stress-driven transposable element de-repression dynamics and virulence evolution in a fungal pathogen
… Transposable elements (TEs) are drivers of genome … of the major wheat pathogen
Zymoseptoria tritici. We experimentally … repeat transposable element and long terminal …
Zymoseptoria tritici. We experimentally … repeat transposable element and long terminal …