Repression of genes by DNA methylation depends on CpG density and promoter strength: evidence for involvement of a methyl‐CpG binding protein.

J Boyes, A Bird - The EMBO journal, 1992 - embopress.org
Repression of transcription from densely methylated genes can be mediated by the methyl‐CpG
binding protein MeCP‐1 (Boyes and Bird, 1991). Here we have investigated the effect …

[HTML][HTML] Tuning Promoter Strength through RNA Polymerase Binding Site Design in Escherichia coli

RC Brewster, DL Jones, R Phillips - PLoS computational biology, 2012 - journals.plos.org
strength with which polymerase binds the promoter, and the number of transcription factors
present when that promoter … to predictively tune the binding strength of RNAP to the promoter. …

[HTML][HTML] Sequence-specific DNA binding by the S. shibatae TFIIB homolog, TFB, and its effect on promoter strength

SA Qureshi, SP Jackson - Molecular cell, 1998 - cell.com
… together with the archaeal TATA-binding protein (TBP) to direct … promoter and show that
the region of DNA immediately upstream of the TATA-like A box influences promoter strength

Relationship between promoter sequence and its strength in gene expression

J Li, Y Zhang - The European physical journal E, 2014 - Springer
… , but also meaningful to understand the mechanism of promoter in gene transcription. In this
promoter strength and nucleotide sequence. Our analysis shows that promoter strength is …

Classification and strength measurement of stationary-phase promoters by use of a newly developed promoter cloning vector

T Shimada, H Makinoshima, Y Ogawa, T Miki… - Journal of …, 2004 - Am Soc Microbiol
… , we analyzed the strength and specificity of promoters associated with the stationary-phase …
factors are DNA-binding proteins and interact with RNA polymerase when both bind to their …

The gene and processed pseudogenes of the rat mitochondrial single-strand DNA-binding protein: structure and promoter strength analyses

S Gupta, GC Van Tuyle - Gene, 1998 - Elsevier
The gene for the rat mitochondrial single-stranded DNA-binding protein (mtSSB) was amplified
by PCR and isolated as several overlapping genomic clones. The clones encompassed …

The upstream region of the human gamma-globin gene promoter. Identification and functional analysis of nuclear protein binding sites

KT McDonagh, HJ Lin, CH Lowrey, DM Bodine… - Journal of Biological …, 1991 - ASBMB
… overall promoter strength in transient assays, We have focused on two protein binding sites,
-… Our conclusion that an AT-binding protein demonstrate a methylation interference pattern …

[HTML][HTML] The bacterial promoter spacer modulates promoter strength and timing by length, TG-motifs and DNA supercoiling sensitivity

CA Klein, M Teufel, CJ Weile, P Sobetzko - Scientific reports, 2021 - nature.com
… modulate the ensuing expression strength of the … promoters, the basal promoter structure
is interwoven with additional regulatory sites to bind proteins that modulate expression strength

Controlling promoter strength and regulation in Saccharomyces cerevisiae using synthetic hybrid promoters

J Blazeck, R Garg, B Reed… - Biotechnology and …, 2012 - Wiley Online Library
… Fold fluorescence improvement between basal core strength and enhancer-activated
hybrid promoter strength is given for various constitutive hybrid promoters created in this study. …

[图书][B] The role of TATA binding protein and other factors in determining promoter strength

JJ Stewart - 2001 - search.proquest.com
… , and occurs at core promoters that typically consist of a TATA box and initiator element (63).
The first step in promoter recognition is binding of TATA-binding protein (TBP) to the …