… ChIP-Atlas is powered by comprehensively integrating all data sets from high-throughput
ChIP-seq and DNase-seq, … all the ATAC-seq and whole-genome bisulfite-seq data for six model …

… In the second phase of ChIP-Atlas (ChIP-Atlas 2.0) (2), we integrated tens of thousands
of … chromatin with sequencing (ATACseq) and whole-genome bisulfite sequencing (Bisulfite-seq) …

… Here we used whole-genome bisulfite sequencing from 10 … potential bias due to arbitrary
sequence features or probe affinity … factor binding from ChIP-seq supports mechanistic roles of …

… Furthermore, we obtained data from primary cancers in the Cancer Genome Atlas (TCGA),
and confirmed that some highly methylated genes in cancer cells were also significantly …

… For example, HT-TREBS (high-throughput targeted repeat element bisulfite sequencing) …
bisulfite-sequencing coupled with amplification typing of L1 active subfamilies (bs-ATLAS-seq…

… We present a human methylome atlas based on deep whole-genome bisulfite sequencing
of 39 sorted, primary cell types and use this dataset to address fundamental questions in …

… In contrast, bisulfite sequencing-based methods enable a direct measurement of … 1B gives
a brief overview on the general workflow of the most relevant bisulfite sequencing methods …

… methylome atlas, based on deep whole-genome bisulfite sequencing, … Unsupervised
clustering of the atlas recapitulates key … The atlas provides an essential resource for study of gene …

… ) have yet to be examined in an unbiased sequencing-based approach. Here, we present
the first analysis of DMRs from whole genome bisulfite sequencing (WGBS) data of human DS …

… -bisulfite sequencing, bisulfite treatment is directly applied to extracted DNA. The sonication
step in pre-bisulfite sequencing is removed since bisulfite … After bisulfite conversion, random …