Dynamic DNA methylation across diverse human cell lines and tissues

KE Varley, J Gertz, KM Bowling, SL Parker… - Genome …, 2013 - genome.cshlp.org
… in defining cell types, and is disrupted in many diseases. We describe large-scale single-base
resolution DNA methylation profiling on a diverse collection of 82 human cell lines and …

A systematic profile of DNA methylation in human cancer cell lines

MF Paz, MF Fraga, S Avila, M Guo, M Pollan… - Cancer research, 2003 - AACR
… in the cultured cancer cell lines has any effect on DNA methylation patterns, we studied four
… our collection of human cancer cell lines. The four germ-line variants analyzed are relatively …

A comparative analysis of DNA methylation across human embryonic stem cell lines

PY Chen, S Feng, JWJ Joo, SE Jacobsen, M Pellegrini - Genome biology, 2011 - Springer
… differences in the global methylation levels between cell lines; the CG methylation level is
highest … A similar trend is also observed for non-CG methylation. The differences in methylation

DNA methylation profiles of ovarian epithelial carcinoma tumors and cell lines

S Houshdaran, S Hawley, C Palmer, M Campan… - PloS one, 2010 - journals.plos.org
DNA methylation between cell lines and tumors, using a two-sample t-test to compare DNA
methylation … Only the 1,110 CpG sites that met a minimal level of variability in methylation

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

JT Bell, AA Pai, JK Pickrell, DJ Gaffney, R Pique-Regi… - Genome biology, 2011 - Springer
… in methylation can affect transcription and phenotypic variation [1], but the source of variation
in DNA methylation … Substantial evidence of inter-individual variation in DNA methylation

Cytosine methylation profiling of cancer cell lines

M Ehrich, J Turner, P Gibbs, L Lipton… - Proceedings of the …, 2008 - National Acad Sciences
DNA methylation profiling study, which includes the quantitative analysis of >500 genomic
target regions representing >400 genes in 59 cell lines … -related DNA methylation changes …

Hierarchical clustering of lung cancer cell lines using DNA methylation markers

AK Virmani, JA Tsou, KD Siegmund, LYC Shen… - … Biomarkers & Prevention, 2002 - AACR
… Within this group, a large cluster consisted almost exclusively of SCLC cell lines. Our
results show that DNA methylation patterns differ between NSCLC and SCLC cell lines and …

DNA methylation and cancer

RL Momparler, V Bovenzi - Journal of cellular physiology, 2000 - Wiley Online Library
DNA suggesting that epigenetics plays an important role in tumorigenesis. The potent and
specific inhibitor of DNA methylation, 5-… genes in human tumor cell lines. These genes may be …

The Role of DNA Methylation in Expression of the p19/p16 Locus in Human Bladder Cancer Cell Lines

ML Gonzalgo, T Hayashida, CM Bender, MM Pao… - Cancer research, 1998 - AACR
… was restored by treatment of a human bladder cancer cell line with 5-Aza-CdR, suggesting
… also be silenced by DNA methylation. One important function of DNA methylation may be to …

DNA methylation and gene expression

A Razin, H Cedar - Microbiological reviews, 1991 - Am Soc Microbiol
DNA METHYLATION PATTERNS IN CELL LINES Analysis of endogenous genes and of …
in somatic cells in culture suggests that DNA methylation patterns are stable in such lines. …