… ChIP-Atlas is powered by comprehensively integrating all data sets from high-throughput
ChIP-seq and DNase-seq, … all the ATAC-seq and whole-genome bisulfite-seq data for six model …

… In the second phase of ChIP-Atlas (ChIP-Atlas 2.0) (2), we integrated tens of thousands
of … chromatin with sequencing (ATACseq) and whole-genome bisulfite sequencing (Bisulfite-seq) …

… Here, we used ChIP-BS-seq to examine methylation of the DNA fragments precipitated by
the antibodies to both H3K27me3 and H3K4me3 histone modifications. We showed that, for a …

… methylome atlas, based on deep whole-genome bisulfite sequencing, … Unsupervised
clustering of the atlas recapitulates key … The atlas provides an essential resource for study of gene …

… Next, we fully exploited almost all publicly available human TF ChIP-Seq data in ChIP-Atlas
to identify TFs … In addition, the public Bisulfite-Seq data set in our previously developed ChIP-…

… For example, HT-TREBS (high-throughput targeted repeat element bisulfite sequencing) …
bisulfite-sequencing coupled with amplification typing of L1 active subfamilies (bs-ATLAS-seq…

… results using genome-wide ChIP-Seq and bisulphite sequencing datasets. We provide the …
ENCODE ChIP-Seq, ChIP-Atlas ChIP-Seq and WGBS (Whole Genome Bisulfite Sequencing) …

… RNA bisulfite sequencing (RNA BS-seq) has been a gold standard technique in the detection
of cytosine modification, because it is a reverse transcription-based method which permits …

… We present a human methylome atlas based on deep whole-genome bisulfite sequencing
of 39 sorted, primary cell types and use this dataset to address fundamental questions in …

… -seqとBisul te-seqデータを 新たに統合し,転写調節領域のエピゲノム状態をより多 面的に捉えられる
ようになった.本稿では,ChIP-Atlas… ChIP-Atlasは2015年の一般公開以来,生命科学分 野における…