ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data
… This epigenomic landscape can also be characterized for multiple genes and genomic loci
by … Therefore, ChIP-Atlas provides a panoramic view of the whole epigenomic landscape. All …
by … Therefore, ChIP-Atlas provides a panoramic view of the whole epigenomic landscape. All …
ChIP-Atlas 3.0: a data-mining suite to explore chromosome architecture together with large-scale regulome data
… epigenomic landscapes, powered by the comprehensive integration of over 376 000 public
ChIP-… ChIP-Atlas 3.0 that enhances clarity by incorporating additional tracks for genomic and …
ChIP-… ChIP-Atlas 3.0 that enhances clarity by incorporating additional tracks for genomic and …
[HTML][HTML] Epigenetic landscape of drug responses revealed through large-scale ChIP-seq data analyses
… In summary, CTD, ChIP-Atlas, and DisGeNET include information about biologically significant
genes and proteins, and are therefore suitable for elucidating the MoAs of chemicals and …
genes and proteins, and are therefore suitable for elucidating the MoAs of chemicals and …
Integrative analysis of public ChIP-seq experiments reveals a complex multi-cell regulatory landscape
A Griffon, Q Barbier, J Dalino, J van Helden… - Nucleic acids …, 2015 - academic.oup.com
… Here, we report the complex landscape of TFBS in the human genome. We have constructed
a global map of regulatory elements by compiling the genomic localization of 132 different …
a global map of regulatory elements by compiling the genomic localization of 132 different …
[HTML][HTML] An epigenome atlas of neural progenitors within the embryonic mouse forebrain
… It is well established that changes in a cell’s epigenetic landscape alter cell fate decisions
… Thus, a thorough characterization of the epigenomic landscape during neurogenesis is …
… Thus, a thorough characterization of the epigenomic landscape during neurogenesis is …
[HTML][HTML] A unique epigenomic landscape defines human erythropoiesis
… Epigenomic landscape of erythropoiesis reveals stage-… The epigenome of terminally
differentiating erythroid cells … These epigenomic and transcriptome data are powerful tools to …
differentiating erythroid cells … These epigenomic and transcriptome data are powerful tools to …
An atlas of wheat epigenetic regulatory elements reveals subgenome divergence in the regulation of development and stress responses
… gene expression based on RE epigenome between epigenome correlation method and the
… We herein characterized the epigenomic architecture in a large spectrum of samples, and …
… We herein characterized the epigenomic architecture in a large spectrum of samples, and …
The chromatin accessibility landscape of primary human cancers
…, C Curtis, Cancer Genome Atlas Analysis Network†… - Science, 2018 - science.org
… Nonetheless, the gene regulatory landscapes of these tumors have largely been inferred …
samples from TCGA, identifying diverse regulatory landscapes across 23 cancer types. These …
samples from TCGA, identifying diverse regulatory landscapes across 23 cancer types. These …
[HTML][HTML] Deciphering H3K4me3 broad domains associated with gene-regulatory networks and conserved epigenomic landscapes in the human brain
… As a quality control and validation of ChIP-seq experiments, we compiled the H3K4me3
epigenomic landscape patterns for RefSeq-annotated genes across all samples and computed …
epigenomic landscape patterns for RefSeq-annotated genes across all samples and computed …
[HTML][HTML] Chromatin accessibility maps of chronic lymphocytic leukaemia identify subtype-specific epigenome signatures and transcription regulatory networks
… To provide a basis for studying epigenome deregulation in CLL, here we present genome-…
in the chromatin landscape of CLL, established a community resource for studying epigenome …
in the chromatin landscape of CLL, established a community resource for studying epigenome …
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