Predicting methylation status of CpG islands in the human brain
… of methylation status of CpG islands or CGIFs, we calculated a score defined as the proportion
of m 5 CpGs out of all CpGs in … CGIFs with score >0.5 were reported as methylation-prone, …
of m 5 CpGs out of all CpGs in … CGIFs with score >0.5 were reported as methylation-prone, …
Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.
JG Herman, JR Graff, S Myöhänen… - Proceedings of the …, 1996 - National Acad Sciences
… the methylation status of virtually any CpGrich region. In addition to detecting aberrant CpG
island methylation of tumor suppressor genes, MSP will be useful for monitoring CpG islands …
island methylation of tumor suppressor genes, MSP will be useful for monitoring CpG islands …
CpG island methylation status of miRNAs in esophageal squamous cell carcinoma
X Chen, H Hu, X Guan, G Xiong, Y Wang… - … journal of cancer, 2012 - Wiley Online Library
… -129 is dysregulated in ESCC and methylated in colon cancer, endometrial carcinoma and
… the methylation status of these miRNAs and to determine whether CpG island methylation is …
… the methylation status of these miRNAs and to determine whether CpG island methylation is …
Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale
V Barrera, MA Peinado - Nucleic acids research, 2012 - academic.oup.com
… Methylation of a CpG island is a faithful marker of silencing of its associated gene. Different
approaches report the methylation status of a CpG island … and CpG island methylation levels (…
approaches report the methylation status of a CpG island … and CpG island methylation levels (…
CpG island methylation status in gastric carcinoma with and without infection of Epstein-Barr virus
MS Chang, H Uozaki, JM Chong, T Ushiku… - Clinical Cancer …, 2006 - AACR
… Purpose: EBV-associated gastric carcinoma shows global CpG island methylation of … CpG
island methylator phenotype (CIMP) status in gastric carcinoma, we investigated methylation …
island methylator phenotype (CIMP) status in gastric carcinoma, we investigated methylation …
A comprehensive analysis of allelic methylation status of CpG islands on human chromosome 21q
Y Yamada, H Watanabe, F Miura, H Soejima… - Genome …, 2004 - genome.cshlp.org
… to examine allelic methylation status, we planned a comprehensive methylation analysis of
… thoroughly in silico and examine their methylation status in a truly comprehensive manner. …
… thoroughly in silico and examine their methylation status in a truly comprehensive manner. …
Expression of mRNA for DNA methyltransferases and methyl-CpG–binding proteins and DNA methylation status on CpG islands and pericentromeric satellite regions …
Y Saito, Y Kanai, M Sakamoto, H Saito, H Ishii… - Hepatology, 2001 - Elsevier
… level of DNA methyltransferases may contribute to DNA methylation patterns in HCCs,
we analyzed the DNA methylation status on 7 type C CpG islands in the same cohort. DNA …
we analyzed the DNA methylation status on 7 type C CpG islands in the same cohort. DNA …
[HTML][HTML] CpGIMethPred: computational model for predicting methylation status of CpG islands in human genome
H Zheng, H Wu, J Li, SW Jiang - BMC medical genomics, 2013 - Springer
… methylation patterns. Here, we develop CpGIMethPred, the support vector machine-based
models to predict the methylation status of the CpG islands in … effective (CpG island specific …
models to predict the methylation status of the CpG islands in … effective (CpG island specific …
[HTML][HTML] Prediction of CpG island methylation status by integrating DNA physicochemical properties
… methylation status. In the present study, we proposed a Naïve Bayes model to predict CpG
island methylation status. In … model in predicting the DNA methylation status was 88.22%. This …
island methylation status. In … model in predicting the DNA methylation status was 88.22%. This …
CpG islands: algorithms and applications in methylation studies
… Moreover, identification of CGIs is an initial step in many recent studies for predicting
methylation status as well as in the design of methylation detection platforms. We reviewed the …
methylation status as well as in the design of methylation detection platforms. We reviewed the …
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