Rapid quantitation of methylation differences at specific sites using methylation-sensitive single nucleotide primer extension (Ms-SNuPE)
ML Gonzalgo, PA Jones - Nucleic acids research, 1997 - academic.oup.com
… the original CpG sites can be easily determined by incubating the gel-isolated PCR product,
primer(s), and Taq polymerase with either [ 32 P]dCTP or [ 32 P]TTP followed by denaturing …
primer(s), and Taq polymerase with either [ 32 P]dCTP or [ 32 P]TTP followed by denaturing …
Analysis of the methylation status of imprinted genes based on methylation-specific polymerase chain reaction combined with denaturing high-performance liquid …
A Baumer - Methods, 2002 - Elsevier
… The resulting modified sequences differ markedly from the original genomic sequence, …
alleles differ at a number of positions corresponding to differentially methylated cytosines in …
alleles differ at a number of positions corresponding to differentially methylated cytosines in …
DNA methylation differences associated with tumor tissues identified by genome scanning analysis
… Initial denaturation was performed at 94C for 2 min, followed by five cycles under low-stringency
conditions of 94C for 30 s, 40C for 60 s, 72C for 90 s, and then 30 cycles under higher …
conditions of 94C for 30 s, 40C for 60 s, 72C for 90 s, and then 30 cycles under higher …
[HTML][HTML] Different denaturation rates between methylated and non-methylated genomic DNA can result in allele-specific PCR amplification
B Hilary MS, L Margaret, S Sasi D, K Wee Teik… - Open Journal of …, 2011 - scirp.org
… (2010) DNA methylation of developmental genes in pediatric medulloblastomas identified
by denaturation analysis of methylation differences. Proceedings of the National Academy of …
by denaturation analysis of methylation differences. Proceedings of the National Academy of …
Denaturing gradient gel electrophoresis to detect methylation changes in DNA
M Shiraishi - Epigenetics Protocols, 2004 - Springer
… denaturing regions of the gradient gel and results in focusing of the band. This property can
be applied to detect the difference in melting temperature between methylated … methylation …
be applied to detect the difference in melting temperature between methylated … methylation …
DNA methylation analysis by MethyLight technology
BN Trinh, TI Long, PW Laird - Methods, 2001 - Elsevier
… bisulfiteconverted methylation differences inbetween the two primers can be analyzed by any
… DNA is first denatured by as the ratio of polymerase to DNA template is reduced (phase 3). …
… DNA is first denatured by as the ratio of polymerase to DNA template is reduced (phase 3). …
DNA methylation analysis: choosing the right method
S Kurdyukov, M Bullock - Biology, 2016 - mdpi.com
… , and relative methylation is calculated based on the difference of their Ct … of the analysis
for heterogeneous samples, methylation-… Currently, it requires the use of denaturing gradient …
for heterogeneous samples, methylation-… Currently, it requires the use of denaturing gradient …
In-tube DNA methylation profiling by fluorescence melting curve analysis
J Worm, A Aggerholm, PER GuLDbERG - Clinical chemistry, 2001 - academic.oup.com
… PCR was initiated by incubation for 1 min at 95 C to denature the TaqStart Antibody, … of
uracils to thymine, methylated and unmethylated alleles are predicted to differ in thermal stability …
uracils to thymine, methylated and unmethylated alleles are predicted to differ in thermal stability …
Qualitative and quantitative polymerase chain reaction-based methods for DNA methylation analyses
IHN Wong - Clinical Applications of PCR, 2006 - Springer
… this method for the quantification of DNA methylation differences at specific CpG sites. In …
or [ 32 P] dTTP followed by denaturing polyacrylamide gel electrophoresis and phosphorimage …
or [ 32 P] dTTP followed by denaturing polyacrylamide gel electrophoresis and phosphorimage …
… methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence …
… the DNA methylation differences of hypomethylated DMRs. … denaturing step prior to
immunoprecipitation. That is, the CpG dense fragments either do not undergo complete denaturation …
immunoprecipitation. That is, the CpG dense fragments either do not undergo complete denaturation …