[PDF][PDF] Direct detection and quantification of methylation in nucleic acid sequences using high-resolution melting analysis
CMR López, BG Asenjo, AJ Lloyd, MJ Wilkinson - Anal. Chem., 2010 - academia.edu
… With successful thermal denaturation profile differences observed for methylated,
hemimethylated, and nonmethylated fragments (Figure 1), we next tested the feasibility of …
hemimethylated, and nonmethylated fragments (Figure 1), we next tested the feasibility of …
Preparation of genome-wide DNA fragment libraries using bisulfite in polyacrylamide gel electrophoresis slices with formamide denaturation and quality control for …
SS Ranade, CB Chung, G Zon, VL Boyd - Analytical biochemistry, 2009 - Elsevier
… -wide library constructions intended for DNA methylation analysis by alternative high-throughput …
to reveal noticeable differences despite the aforementioned differences in amplification …
to reveal noticeable differences despite the aforementioned differences in amplification …
DHPLC-based method for DNA methylation analysis of differential methylated regions from imprinted genes
P Couvert, K Poirier, A Carrie, C Chalas… - …, 2003 - Taylor & Francis
… In the current study, we used a denaturing high-performance … to analyze the methylation of
differentially methylated regions (… denaturing conditions and the magnitude of the differences …
differentially methylated regions (… denaturing conditions and the magnitude of the differences …
Tissue-specific differences in DNA methylation in various mammals
MA Gama-Sosa, RM Midgett, VA Slagel… - … et Biophysica Acta (BBA …, 1983 - Elsevier
… liquid chromatographic analysis of DNA … -specific differences in the extent of methylation
of their cytosine residues. Several similarities in the patterns of tissue-specific DNA methylation …
of their cytosine residues. Several similarities in the patterns of tissue-specific DNA methylation …
DNA methylation detection: bisulfite genomic sequencing analysis
Y Li, TO Tollefsbol - Epigenetics protocols, 2011 - Springer
… denaturation since sodium bisulfite can only react with cytosine in single-stranded DNA.
Therefore, complete DNA denaturation … (6), genomic DNA is denatured in high sodium bisulfite …
Therefore, complete DNA denaturation … (6), genomic DNA is denatured in high sodium bisulfite …
Methods: DNA methylation
O El-Maarri - Peroxisomal Disorders and Regulation of Genes, 2003 - Springer
… if it is either methylated or in double stranded DNA. Thus the DNA should be denatured prior
to … or unmethylated products taking advantage of the sequence differences resulting after …
to … or unmethylated products taking advantage of the sequence differences resulting after …
Identification of DNA methylation differences during tumorigenesis by methylation-sensitive arbitrarily primed polymerase chain reaction
… Initial denaturation at 94 C for 2 min, followed by five cycles at … Initial denaturation is for 5
min at 94 C and 34 cycles at low-… of formamide–dye buffer and denatured by heating at 90 C for …
min at 94 C and 34 cycles at low-… of formamide–dye buffer and denatured by heating at 90 C for …
DNA methylation analysis by pyrosequencing
J Tost, IG Gut - Nature protocols, 2007 - nature.com
… Especially, incomplete denaturation of the double-stranded DNA before conversion leads to
… , as the sequence difference of formerly methylated and unmethylated molecules induced …
… , as the sequence difference of formerly methylated and unmethylated molecules induced …
DNA Methylation Analysis in the Intestinal Epithelium—Effect of Cell Separation on Gene Expression and Methylation Profile
AC Jenke, J Postberg, T Raine, KM Nayak, M Molitor… - PLoS …, 2013 - journals.plos.org
… As demonstrated in Figure 4a, we observed consistent differences in DNA methylation of all
… After denaturation DNA was then immunoprecipitated using 1 µg of mouse monoclonal anti-…
… After denaturation DNA was then immunoprecipitated using 1 µg of mouse monoclonal anti-…
Alterations in DNA helix stability due to base modifications can be evaluated using denaturing gradient gel electrophoresis
M Collins, RM Myers - Journal of molecular biology, 1987 - Elsevier
… that differ by a single base-pair can be separated by denaturing … Base modifications such
as methylation are also known to affect … in denaturing gradient gels. The presence of a single …
as methylation are also known to affect … in denaturing gradient gels. The presence of a single …