[HTML][HTML] Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos

HJ Lee, RF Lowdon, B Maricque, B Zhang… - Nature …, 2015 - nature.com
… methylation profiles of zebrafish developing embryos and sperm by using two … developmental
stages. We find that a substantial portion of dsDMRs behave as developmental enhancers, …

A unique chromatin signature uncovers early developmental enhancers in humans

A Rada-Iglesias, R Bajpai, T Swigut, SA Brugmann… - Nature, 2011 - nature.com
enhancer bookmarking during early embryonic development. Poised developmental enhancers
… During differentiation, appropriate developmental and signalling cues are able to rapidly …

[HTML][HTML] Super-enhancers and CTCF in early embryonic cell fate decisions

P Agrawal, S Rao - Frontiers in cell and developmental biology, 2021 - frontiersin.org
… measure but reflect selected key studies in the field focusing on embryonic stem cells (ESCs).
For further information on enhancer and CTCF functions, we suggest these reviews (Ong …

Transcription factors: from enhancer binding to developmental control

F Spitz, EEM Furlong - Nature reviews genetics, 2012 - nature.com
… A recent study of mammalian embryonic stem cells revealed that several enhancers seem
to be protected from DNA methylation 113 , suggesting that specific mechanisms may prevent …

[HTML][HTML] Combinatorial binding in human and mouse embryonic stem cells identifies conserved enhancers active in early embryonic development

J Göke, M Jung, S Behrens, L Chavez… - PLoS computational …, 2011 - journals.plos.org
… ES cells with developmental enhancers we … as enhancers during early development. This
finding provides an unknown link between the gene regulatory networks of ES cells and early

[HTML][HTML] Identification and prediction of developmental enhancers in sea urchin embryos

C Arenas-Mena, S Miljovska, EJ Rice, J Gurges… - Bmc Genomics, 2021 - Springer
… candidate developmental enhancers in 20 h sea urchin embryos … also characterized in 12 h
embryos. The genomic profile of 3′ … other early embryo TREs, ME has distinct enhancer and …

Organization of developmental enhancers in the Drosophila embryo

D Papatsenko, Y Goltsev, M Levine - Nucleic acids research, 2009 - academic.oup.com
… as bona fide enhancers and produced localized patterns of gene expression across the DV
axis of early embryos. The other set produced no expression in transgenic embryos, despite …

[PDF][PDF] Transcriptional enhancers in animal development and evolution

M Levine - Current Biology, 2010 - cell.com
developmental enhancers, providing a foundation for investigating the question of whether
… regions of the early embryo. As pSmads become activated in the vegetal embryonic cells (…

Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis

O Bogdanović, A Fernandez-Miñán, JJ Tena… - Genome …, 2012 - genome.cshlp.org
… of H3K27ac enrichment in the early embryo and that stage-specific … the embryonic epigenomes
associated with early zebrafish … -like protein on early developmental enhancers, thereby …

Increased enhancer–promoter interactions during developmental enhancer activation in mammals

Z Chen, V Snetkova, G Bower, S Jacinto, B Clock… - Nature Genetics, 2024 - nature.com
enhancer interactome maps across ten mouse embryonic tissues for 935 bona fide developmental
enhancers … thousands of enhancer contacts and found that most enhancer loci display …