… Genome-wide DNA methylation mapping uncovers epigenetic … DNA methylation analysis
in non-model organisms, we developed an integrated approach for studying DNA methylation …

… Genome-wide DNA methylation analysis is one of the most common epigenetic processes
analysed for genome characterization and differential DNA methylation assessment. Previous …

… we also report a benchmark of commonly used methods for differential methylation analysis.
… to benchmark existing methods for differential methylation analysis, allowing the user to …

… The purpose of our study was to investigate the DNA methylation … DNA methylation analysis
was performed by using Illumina … This study set to investigate DNA methylation changes in …

… suggest differential DNA methylation that is not due to alterations in DNA methylation. The
analysis of differential DNA methylation optimally requires the use of purified cell populations. …

… These results strongly suggest that differential DNA methylation is … methylated in peripheral
blood. Selected gene promoters have also been analysed for differential DNA methylation in …

… for DNA methylation analyses, all the following analyses … methylated sites with a
differential methylation call, as defined by the gamma fit model (“unmethylated”, “marginal”, “methylated…

… We introduce a novel fragment-based approach for investigating DNA methylation patterns
for reduced representation bisulphite sequencing data. Further, DMAP provides the identity …

… To discover DNA methylation changes that associate with gene … differential methylation
profile in the vicinity of a gene’s promoter (Figure 1). We represent the differential methylation for …

… Integrating genome-wide DNA methylation analysis of retina … , replicable change in DNA
methylation in the promoter … meta-analysis combining the differential methylation analysis …