Detection of significantly differentially methylated regions in targeted bisulfite sequencing data
… pipeline to detect DNA methylation differences between cancer … DMRs by placing methylation
differences of various intensities … Differences d were sampled from a truncated Gamma: …
differences of various intensities … Differences d were sampled from a truncated Gamma: …
Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential function
C Schröder, E Leitão, S Wallner, G Schmitz… - Epigenetics & …, 2017 - Springer
… We modified BSmooth [13] to identify differentially methylated regions with a minimum
difference of 0.8 between the two synthetic methylomes. BSmooth is designed to …
difference of 0.8 between the two synthetic methylomes. BSmooth is designed to …
Differences in DNA methylation between human neuronal and glial cells are concentrated in enhancers and non-CpG sites
A Kozlenkov, P Roussos, A Timashpolsky… - Nucleic acids …, 2014 - academic.oup.com
… regions harbor DNA methylation differences that distinguish … methylation differences relate
to cell-type–specific gene expression? We found that sites that are differentially methylated (…
to cell-type–specific gene expression? We found that sites that are differentially methylated (…
A comparative analysis of DNA methylation across human embryonic stem cell lines
… From BS-seq data we also identified CG sites that are differentially methylated between the
two … Interestingly, we observe significant differences in the global methylation levels between …
two … Interestingly, we observe significant differences in the global methylation levels between …
Identification of differentially methylated cell types in epigenome-wide association studies
… differential methylation. We validated CellDMC on in silico mixtures of DNA methylation data
generated with different … the-art methods did not identify differential methylation. By applying …
generated with different … the-art methods did not identify differential methylation. By applying …
Comparison of DNA methylation profiles in human fetal and adult red blood cell progenitors
… We sought to identify differentially methylated single … differentially methylated CpGs are
hypermethylated in fetal erythroblasts. We can explore further these DNA methylation differences …
hypermethylated in fetal erythroblasts. We can explore further these DNA methylation differences …
A cross-cohort analysis of autosomal DNA methylation sex differences in the term placenta
… analysis of sex differences in autosomal DNAme in the term … differentially methylated CpGs
and identify several key features of these loci that suggest their relevance to sex differences …
and identify several key features of these loci that suggest their relevance to sex differences …
[HTML][HTML] Genome-wide mapping of DNA methylation: a quantitative technology comparison
C Bock, EM Tomazou, A Brinkman, F Müller… - Nature …, 2010 - ncbi.nlm.nih.gov
… immunoprecipitation, MethylCap-seq: methylated DNA capture by affinity … accurate DNA
methylation data. However, these methods differ in their ability to detect differentially methylated …
methylation data. However, these methods differ in their ability to detect differentially methylated …
Longitudinal DNA methylation differences precede type 1 diabetes
RK Johnson, LA Vanderlinden, F Dong, PM Carry… - Scientific Reports, 2020 - nature.com
… The most statistically significant of 28 differentially methylated regions (DMRs) associated
… Our exploration of DNA methylation differences by natural history of the autoimmune phase …
… Our exploration of DNA methylation differences by natural history of the autoimmune phase …
ZNF718, HOXA4, and ZFP57 are differentially methylated in periodontitis in comparison with periodontal health: epigenome‐wide DNA methylation pilot study
HG Hernández… - Journal of …, 2021 - Wiley Online Library
… the differential counts into the statistical model used to determine DNA methylation differences
… Furthermore, there is evidence about the DNA methylation alterations in periodontitis are …
… Furthermore, there is evidence about the DNA methylation alterations in periodontitis are …