Comparative pan-cancer DNA methylation analysis reveals cancer common and specific patterns

X Yang, L Gao, S Zhang - Briefings in bioinformatics, 2017 - academic.oup.com
DNA methylation possible. Here we investigate cancer common and specific DNA methylation
patterns among 5480 DNA methylation … We first define differentially methylated CpG sites (…

[HTML][HTML] Genome-wide DNA methylation analysis reveals a potential mechanism for the pathogenesis and development of uterine leiomyomas

R Maekawa, S Sato, Y Yamagata, H Asada, I Tamura… - PloS one, 2013 - journals.plos.org
DNA methylation and mRNA expression were investigated in leiomyomas and in myometrium
with and without leiomyomas. Profiles of DNA methylation … whose DNA methylation and …

Genomewide DNA methylation analysis reveals novel targets for drug development in mantle cell lymphoma

VV Leshchenko, PY Kuo, R Shaknovich… - Blood, The Journal …, 2010 - ashpublications.org
DNA methylation in MCL, we performed a genomewide analysis of MCL DNA methylation
and … We report that promoter DNA methylation is aberrantly distributed in the MCL genome …

Genome-wide parent-of-origin DNA methylation analysis reveals the intricacies of human imprinting and suggests a germline methylation-independent mechanism of …

C Tayama, V Romanelli, A Martin-Trujillo… - Genome …, 2014 - genome.cshlp.org
… of imprinted methylation coupled with allelic expression analysis of nearby transcripts. This
analysis reveals that 30 regions of parentally inherited differential methylation are observed …

[HTML][HTML] Comprehensive DNA methylation analysis reveals a common ten-gene methylation signature in colorectal adenomas and carcinomas

ÁV Patai, G Valcz, P Hollósi, A Kalmár, B Peterfia… - PloS one, 2015 - journals.plos.org
analysis of promoter hypermethylation provides insight into the role and extent of DNA
methylation … Field effects were analyzed in tissues 1 cm (n = 5) and 10 cm (n = 5) from the margin …

[HTML][HTML] Quantitative DNA methylation analyses reveal stage dependent DNA methylation and association to clinico-pathological factors in breast tumors

J Klajic, T Fleischer, E Dejeux, H Edvardsen… - BMC cancer, 2013 - Springer
methylation levels in late stage compared to the early stage breast carcinoma. Z-score analysis
revealed significantly lower methylationMethylation levels of PTEN, PPP2R2B, FOXC1, …

Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia

L Pei, JH Choi, J Liu, EJ Lee, B McCarthy, JM Wilson… - Epigenetics, 2012 - Taylor & Francis
… We conducted a genome-wide DNA methylation analysis in CD19 + B-cells from chronic
lymphocytic … This comprehensive DNA methylation analysis will further our understanding of the …

[HTML][HTML] Genome-wide DNA methylation analysis reveals molecular subtypes of pancreatic cancer

NK Mishra, C Guda - Oncotarget, 2017 - ncbi.nlm.nih.gov
… pan cancer DNA methylation analysis of … analyses, we also looked DNA methylation in
distal enhancer region and possible molecular subtypes in TCGA PC by using DNA methylation

Global analysis reveals the crucial roles of DNA methylation during rice seed development

MQ Xing, YJ Zhang, SR Zhou, WY Hu, XT Wu… - Plant …, 2015 - academic.oup.com
… of DNA methylation in suppressing gene transcription. Further analysis revealed the significantly
decreased methylation at … negative correlation between DNA methylation change and …

[HTML][HTML] DNA methylation analysis reveals distinct methylation signatures in pediatric germ cell tumors

JF Amatruda, JA Ross, B Christensen, NJ Fustino… - BMC cancer, 2013 - Springer
… , additional studies of DNA methylation are likely to increase our understanding of the etiology
of pediatric GCTs. In this analysis, we evaluated differences in DNA methylation in cancer-…