[HTML][HTML] Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

KR van Eijk, S de Jong, MPM Boks, T Langeveld… - BMC genomics, 2012 - Springer
… correlation network analysis revealed that i) both transcriptome and methylome are organized
in modules, ii) co-expression modules are generally not preserved in the methylation data …

Transcriptome and DNA methylation analysis reveals molecular mechanisms underlying intrahepatic cholangiocarcinoma progression

Y Peng, G Meng, X Sheng… - Journal of Cellular and …, 2021 - Wiley Online Library
… that DNA methylation drives cancer development. However, the molecular mechanisms
underlying iCCA progression and the roles of DNA methylation still … Pathway analysis revealed

Genome-wide DNA Methylation Analysis Reveals GABBR2 as a Novel Epigenetic Target for EGFR 19 Deletion Lung Adenocarcinoma with Induction Erlotinib …

X Niu, F Liu, Y Zhou, Z Zhou, D Zhou, T Wang, Z Li… - Clinical Cancer …, 2017 - AACR
… In summary, we performed a genome-wide DNA methylation analysis in EGFR mutated lung
adenocarcinoma with induction erlotinib treatment and found that the GABBR2 gene plays …

[HTML][HTML] Comprehensive DNA methylation and extensive mutation analyses reveal an association between the CpG island methylator phenotype and oncogenic …

JG Kim, H Takeshima, T Niwa, E Rehnberg… - Cancer letters, 2013 - Elsevier
… In this study, we conducted comprehensive DNA methylation analysis and extensive mutation
analysis of 30 GCs, and showed (1) that the number of aberrantly methylated genes was …

[HTML][HTML] Genome-wide DNA methylation analysis reveals that mouse chemical iPSCs have closer epigenetic features to mESCs than OSKM-integrated iPSCs

W Ping, J Hu, G Hu, Y Song, Q Xia, M Yao… - Cell Death & …, 2018 - nature.com
… Here we investigated epigenetic DNA methylation features of three different … results reveal
that C-iPSCs are globally hypomethylated compared to 4F-iPSCs and the DNA methylation

[HTML][HTML] Genome-wide DNA methylation analysis in hepatocellular carcinoma

N Yamada, K Yasui, O Dohi, Y Gen… - Oncology …, 2016 - spandidos-publications.com
… microarray analysis in primary HCC (the discovery set). The microarray analysis revealed
that there were 2,670 CpG sites that significantly differed in regards to the methylation level …

Multiple correlation analyses revealed complex relationship between DNA methylation and mRNA expression in human peripheral blood mononuclear cells

FF Xie, FY Deng, LF Wu, XB Mo, H Zhu, J Wu… - Functional & integrative …, 2018 - Springer
… and a genome-wide methylation-mRNA expression quantitative trait locus (eQTL) analysis
in PBMCs in 46 unrelated female subjects. Our findings indicated that DNA methylation has …

[HTML][HTML] Epigenome-wide DNA methylation analysis reveals differentially methylation patterns in skeletal muscle between Chinese Chenghua and Qingyu pigs

W Kai, WU Ping-Xian, W Shu-jie, JI Xiang… - Journal of Integrative …, 2022 - Elsevier
… This study performed a genome-wide DNA methylation analysis between CH and QY pigs
using RRBS. It then identified 10 699 DMCs and 2 760 DMGs associated with these DMCs. …

Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome

A Karlsson, M Jönsson, M Lauss, H Brunnström… - Clinical Cancer …, 2014 - AACR
… Functional analysis revealed enrichment of biologic processes involved in immune response,
… (Supplementary Table S3), consistent with results from the metagene analyses (Fig. 3). …

DNA Methylation Analysis Reveals Potential Mechanism in Takifugu rubripes Against Cryptocaryon irritans Infection

Y Xia, Y Yang, Y Liu, J Cheng, Y Liu, C Li, P Liu - Marine Biotechnology, 2024 - Springer
… , we identified several genes in which DNA methylation is … Network enrichment analysis
revealed that all of these activities … -wide DNA methylation and RNA analysis to reveal the …