CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize

JI Gent, NA Ellis, L Guo, AE Harkess, Y Yao… - Genome …, 2013 - genome.cshlp.org
methylation determined by proximity to genes. Our results further indicate that intergenic
chromatin in … dense CG and CHG methylation and lack of transcription, and one marked by CHH …

Molecular coupling of DNA methylation and histone methylation

H Hashimoto, PM Vertino, X Cheng - Epigenomics, 2010 - Taylor & Francis
DNA methylation profiles suggest that DNA methylation is correlated to histone methylation
… of histone H3 is required for de novo DNA methylation in chromatin. Proc. Natl Acad. …

How does DNA methylation repress transcription?

SU Kass, D Pruss, AP Wolffe - Trends in Genetics, 1997 - cell.com
… unravel the repressive chromatin structure. Although we focus … DNA methylation and gene
expression in dividing cells, DNA … by chromatin modifications dependent on DNA methylation

The role of DNA methylation in mammalian epigenetics

PA Jones, D Takai - Science, 2001 - science.org
… they simply reflect altered chromatin states. The DNA methylation field is currently in a
state of high activity as the links between stable epigenetic states, chromatin structure, and …

Role of protein methylation in chromatin remodeling and transcriptional regulation

MR Stallcup - Oncogene, 2001 - nature.com
DNA methylation is well known to play roles in the regulation of chromatin structure and …
that protein methylation also contributes to the complex web of mechanisms that govern …

[HTML][HTML] DNA methylation signatures follow preformed chromatin compartments in cardiac myocytes

S Nothjunge, TG Nührenberg, BA Grüning… - Nature …, 2017 - nature.com
… of chromatin organization and DNA methylation, we analyze chromatin interactions (in situ
Hi-C) and DNA methylation (… of DNA methylation signatures for chromatin organization, we …

[HTML][HTML] Chromatin compaction by human MeCP2: assembly of novel secondary chromatin structures in the absence of DNA methylation

PT Georgel, RA Horowitz-Scherer, N Adkins… - Journal of Biological …, 2003 - ASBMB
… to specific methylated regions of the genome, it is unclear whether MeCP2 requires DNA
methylation to bind to chromatin or whether MeCP2 binding influences chromatin structure in …

Analysis of chromatin regulators reveals specific features of rice DNA methylation pathways

F Tan, C Zhou, Q Zhou, S Zhou, W Yang… - Plant …, 2016 - academic.oup.com
methylation. Thus, the function of OsDDM1 and OsDRM2 defines distinct DNA methylation
pathways in the bulk of DNA methylation of … suggests that DNA methylation mechanisms may …

[HTML][HTML] Changes in DNA methylation and chromatin structure of pro-inflammatory cytokines stimulated by LPS in broiler peripheral blood mononuclear cells

J Shen, Y Liu, X Ren, K Gao, Y Li, S Li, J Yao, X Yang - Poultry Science, 2016 - Elsevier
… We address the question whether DNA methylation or the chromatin structure associated with
… IL-1β, IL-6, and TNF-α promoter DNA methylation and chromatin structure were analyzed. …

Epigenetic tete-a-tete: the bilateral relationship between chromatin modifications and DNA methylation

AC D'Alessio, M Szyf - Biochemistry and cell biology, 2006 - cdnsciencepub.com
… believed that DNA methylation was the dominant reaction in determining the chromatin
structure. However, emerging data suggest that chromatin can affect DNA methylation in both …