… Alternatively, DNA methylation (DNAm) profiles have been used to establish an atlas for …
site) has only two states per DNA strand—methylated or non-methylated—and these epigenetic …

… The Cancer Genome Atlas (TCGA) RNA sequencing and DNA methylation (Illumina
HumanMethylation450) databases were utilized for validation. In total, 27 aberrantly …

… The Cancer Genome Atlas (TCGA) offers a multilayered view of genomics and
epigenomics data of many human cancer types. However, the retrieval of expression and …

… DNA methylation atlas covering 21 organs during human fetal development. Analysis of
multiple isogenic organ sets shows that organ-specific DNA methylation … DNA methylation by …

… relies on the spreading 31 of DNA methylation from repeats to … 32 functions of differentially
methylated genes in the different … methylation profiles 34 and suggest that DNA methylation is …

… DNA methylation profile by using all available CpG sites. By integrating DNA methylation
and RNA sequencing (RNA-seq) profiles for 37 cancer types from The Cancer Genome Atlas (…

… models based on DNA methylation for multiple cancer types of The Cancer Genome Atlas
(TCGA); (… (COME) network by integrating DNA methylation and gene expression data of TCGA …

… We first queried the EWAS Atlas database with these overlapping CpGs and identified several
phenotypes and measurable traits that have been previously associated with hundreds of …

… the determination of cellular identity in tissues (cell atlas) and measurement of alterations
pertinent to … atlas initiatives as well as profiling of disease tissues at a cell-type resolution. (64). …

… In this study, we collected the clinical information of LUSC patients in the Cancer Genome
Atlas (TCGA) database and the relevant methylated sequences of the University of California …