Prenatal tobacco smoke exposure affects global and gene-specific DNA methylation

CV Breton, HM Byun, M Wenten, F Pan… - American journal of …, 2009 - atsjournals.org
differences can be detected in DNA from buccal cells, an aero-digestive tissue cell type. We
investigated two types of DNA methylation … study show that differences in methylation can be …

A systematic comparison of quantitative high-resolution DNA methylation analysis and methylation-specific PCR

R Claus, S Wilop, T Hielscher, M Sonnet, E Dahl… - Epigenetics, 2012 - Taylor & Francis
… , we identified significant DNA methylation differences at the … differences between AML
patients and controls. By direct comparison of MSP-derived and MassARRAY-based methylation

Maternal nutrition induces pervasive gene expression changes but no detectable DNA methylation differences in the liver of adult offspring

MV Cannon, DA Buchner, J Hester, H Miller… - PloS one, 2014 - journals.plos.org
… We tested for qualitative differences in DNA methylation between pups born from HF and LF
… loci significantly methylated in all individuals from one group but lacking DNA methylation in …

A genome-wide study of DNA methylation patterns and gene expression levels in multiple human and chimpanzee tissues

AA Pai, JT Bell, JC Marioni, JK Pritchard, Y Gilad - PLoS genetics, 2011 - journals.plos.org
… on inter-species differences in DNA methylation and gene … us to distinguish between
regulatory differences due to either … results suggest that DNA methylation differences in promoter …

Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation

LT Husquin, M Rotival, M Fagny, H Quach, N Zidane… - Genome biology, 2018 - Springer
… population differences in DNA methylationdifferences (~ 70%) are driven by DNA
sequence variants nearby CpG sites, which account for ~ 60% of the variance in DNA methylation

DNA methylation: conducting the orchestra from exposure to phenotype?

FAD Leenen, CP Muller, JD Turner - Clinical epigenetics, 2016 - Springer
… of DNA methylation with an observed phenotype occurs through small differences in the
methylation … Such limited differences in DNA methylation are known to be set during periods of …

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

MJ Aryee, AE Jaffe, H Corrada-Bravo… - …, 2014 - academic.oup.com
… The second panel shows the methylation difference between … The smoothed methylation
difference used for segmentation … The bottom track are the blocks of methylation difference

DNA methylation differences in stress-related genes, functional connectivity and gray matter volume in depressed and healthy adolescents

J Chiarella, L Schumann, FB Pomares, T Frodl… - Journal of affective …, 2020 - Elsevier
methylation, rs-FC and brain structure in healthy adolescents and those diagnosed with
depression. We expect that DNA methylation will … We further hypothesize that DNA methylation

Genome-wide DNA methylation profiles indicate CD8+ T cell hypermethylation in multiple sclerosis

SD Bos, CM Page, BK Andreassen, E Elboudwarej… - PloS one, 2015 - journals.plos.org
DNA methylation differences for CpG-sites tested here do not contribute to MS susceptibility.
In particular, large DNA methylation differences … more subtle DNA methylation changes in …

DNA methylation profiles of lung tumors

S Toyooka, KO Toyooka, R Maruyama… - Molecular cancer …, 2001 - AACR
… Our results demonstrate important differences in the methylation profiles of the major types
of lung tumors. In a comparison of neuroendocrine and NSCLC tumors, the frequency of …