Loss of DNA methylation affects the recombination landscape in Arabidopsis

M Mirouze, M Lieberman-Lazarovich… - Proceedings of the …, 2012 - National Acad Sciences
… To determine by which mechanisms altered levels of DNA methylation influence … , suggest
that DNA methylation affects meiotic recombination in cis. Because DNA methylation exhibits …

DNA methylation disruption reshapes the hematopoietic differentiation landscape

F Izzo, SC Lee, A Poran, R Chaligne, F Gaiti, B Gross… - Nature …, 2020 - nature.com
Mutations in genes involved in DNA methylation (DNAme; for example, TET2 and DNMT3A)
are frequently observed in hematological malignancies 1 , 2 – 3 and clonal hematopoiesis 4 …

DNA methylation underpins the epigenomic landscape regulating genome transcription in Arabidopsis

L Zhao, Q Zhou, L He, L Deng, R Lozano-Duran, G Li… - Genome biology, 2022 - Springer
… of DNA methylation on the histone modification landscape and the relative contributions
of CG and non-CG methylation to this landscape. We found that DNA methylation negatively …

Stage-differentiated ensemble modeling of DNA methylation landscapes uncovers salient biomarkers and prognostic signatures in colorectal cancer progression

S Muthamilselvan, A Raghavendran, A Palaniappan - PloS one, 2022 - journals.plos.org
… Aberrant DNA methylation acts epigenetically to skew the gene transcription rate up or down,
… stage-differentiated modelling of DNA methylation landscapes in colorectal cancer (CRC). …

The DNA methylation landscape of human cancer organoids available at the American type culture collection

R Joshi, M Castro De Moura, D Piñeyro… - Epigenetics, 2020 - Taylor & Francis
… the DNA methylation profiles of human cancer organoids are largely unknown. Herein, we
provide the DNA methylation landscape … exhibit a DNA methylation landscape characteristic of …

Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation

M Colomé-Tatché, S Cortijo… - Proceedings of the …, 2012 - National Acad Sciences
DNA methylation on the meiotic recombination landscape of an Arabidopsis mapping
population. To do so, we use genome-wide DNA methylation … , differentially methylated regions …

A dysregulated DNA methylation landscape linked to gene expression in MLL-rearranged AML

MA Koldobskiy, J Abante, G Jenkinson, E Pujadas… - Epigenetics, 2020 - Taylor & Francis
… to characterize the DNA methylation landscape in MLL-… DNA methylation potential energy
landscapes (PELs) across the genome [Citation10,Citation11]. By treating the methylation

Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in acute myeloid leukemia

A Akalin, FE Garrett-Bakelman, M Kormaksson… - PLoS …, 2012 - journals.plos.org
DNA methylation plays a role in gene expression regulation, and abnormal distribution of
DNA methylation … Here we demonstrate that changes in DNA methylation in AML are not …

Comparison of DNA methylation landscape between Czech and Armenian vineyards show their unique character and increased diversity

K Baránková, A Nebish, J Tříska, J Raddová… - 2021 - digital.csic.es
… is to examine whether DNA methylation can be used to … a DNA methylation pattern and
different geographical origin of analysed samples. For this purpose, DNA methylation landscapes

Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages

Z Zhang, R Butler, DC Koestler, S Bell-Glenn… - Clinical …, 2022 - Springer
… considerable shared epigenetic regulation at the DNA level for immune memory generation.
… cells with DNA methylation changes. Finally, we identified unique DNA methylation patterns …