Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver

AL Brunner, DS Johnson, SW Kim, A Valouev… - Genome …, 2009 - genome.cshlp.org
… In our initial experiments, we asked how DNA methylation patterns change during the
differentiation of hESCs into definitive endoderm and other derivatives. To this end, we generated …

Discovering high-resolution patterns of differential DNA methylation that correlate with gene expression changes

ND VanderKraats, JF Hiken, KF Decker… - Nucleic acids …, 2013 - academic.oup.com
methylation data: we represent differential methylation as an … Our technique uncovers a
diverse set of patterns that are … between these methylation patterns and expression. We further …

Astrocytic abnormalities and global DNA methylation patterns in depression and suicide

C Nagy, M Suderman, J Yang, M Szyf… - Molecular …, 2015 - nature.com
… Specifically, we hypothesized that DNA methylation patterns differ between groups. To test
this, we conducted a genome-wide methylation sequencing study focusing on individuals …

Dietary antioxidants remodel DNA methylation patterns in chronic disease

M Beetch, S Harandi‐Zadeh, K Shen… - British journal of …, 2020 - Wiley Online Library
… the epigenome, specifically, the DNA methylation patterns. These changes result in … patterns
of DNA methylation in chronic disease. Antioxidants remodel the DNA methylation patterns

Genomic patterns of DNA methylation: targets and function of an epigenetic mark

M Weber, D Schübeler - Current opinion in cell biology, 2007 - Elsevier
DNA methylation patterns at regulatory regions are generally … DNA methylation between
cell types, suggesting an additional dynamic component. Such promoter de novo methylation

DNA methylation in early development

A Razin, R Shemer - Human Molecular Genetics, 1995 - academic.oup.com
methylation process in the differentiated gonads (15.5-18.5 days post coitum), forming the
methylation patterns … Specific demethylations then form a terminal methylation pattern which is …

Accuracy of DNA methylation pattern preservation by the Dnmt1 methyltransferase

R Goyal, R Reinhardt, A Jeltsch - Nucleic acids research, 2006 - academic.oup.com
… To simulate the process of the propagation of a DNA methylation pattern, we apply the … of
DNA methylation (31,33) and started with two populations of DNA molecules, one methylated at …

DNA methylation: a historical perspective

AL Mattei, N Bailly, A Meissner - Trends in Genetics, 2022 - cell.com
… Despite this, several fundamental details about the precise role and interpretation of DNA
methylation patterns remain under investigation. Here, we review the field of DNA methylation

MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing …

T Rauch, H Li, X Wu, GP Pfeifer - Cancer research, 2006 - AACR
… We present a new method for analysis of DNA methylation patterns on a genome-wide
scale… enrichment of methylated DNA fragments by a matrix containing the methylated-CpG …

Dynamic DNA methylation patterns in stress response

L Viggiano, MC de Pinto - Plant epigenetics, 2017 - Springer
… of changes in DNA methylation patterns in plant responses … Alterations in DNA methylation
patterns also occur after virus … alterations in the DNA methylation pattern of normally silenced …