The methylome: approaches for global DNA methylation profiling

S Beck, VK Rakyan - Trends in Genetics, 2008 - cell.com
… Therefore, although bisulphite conversion-based DNA methylation profiling on arrays is
not well suited for de novo delineation of DNA methylation profiles, it is suited to high-throughput …

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

A Akalin, M Kormaksson, S Li, FE Garrett-Bakelman… - Genome biology, 2012 - Springer
… In addition, normal human tissues harbor unique DNA methylation profiles [7]. Differential
DNA methylation is usually calculated by comparing methylation levelsbetween multiple …

Methods in DNA methylation profiling

T Zuo, B Tycko, TM Liu, HJL Lin, THM Huang - Epigenomics, 2009 - Taylor & Francis
… as another approach in DNA methylation profiling. We will discuss this methodology and its
… in studying DNA methylation in a later section. Some of the representative DNA methylation

[HTML][HTML] DNA methylation profiles in ovarian cancer: implication in diagnosis and therapy

O Koukoura, DA Spandidos… - Molecular …, 2014 - spandidos-publications.com
… The DNA methylation profile of a tumor cell is a reflection of its somatic lineage, environmental
exposure and genetic predisposition. The DNA methylation profile is therefore distinct for …

DNA methylation profiles of CpG islands for cellular differentiation and development in mammals

K Shiota - Cytogenetic and genome research, 2004 - karger.com
… , DNA methylation pattern implies the methylation status of each CpG, whereas DNA methylation
profile indicates the array of methylation … -wide DNA methylation profiles specific to cells …

DNA methylation: a profile of methods and applications

MF Fraga, M Esteller - Biotechniques, 2002 - Taylor & Francis
… Here we classify the available methods for studying the degree of DNA methy… DNA
methylation, the DNA methylation status of a specific sequence, and how to find new methylation hot …

DNA methylation profiling of human chromosomes 6, 20 and 22

F Eckhardt, J Lewin, R Cortese, VK Rakyan, J Attwood… - Nature …, 2006 - nature.com
… After the HEP pilot study 6 , we sought to establish DNA methylation reference profiles for
three human chromosomes from a representative number of healthy human tissues and …

DNA methylation profiles of lung tumors

S Toyooka, KO Toyooka, R Maruyama… - Molecular cancer …, 2001 - AACR
DNA methylation in lung cancers, we compare and contrast the aberrant methylation profiles
… lines are frequently used as models to study DNA methylation, we compared the patterns of …

DNA methylation profiling: an emerging paradigm for cancer diagnosis

A Papanicolau-Sengos, K Aldape - Annual Review of Pathology …, 2022 - annualreviews.org
DNA methylation profiling is an additional emerging tool that … Tumor DNA methylation profiling
has led to the identification … In addition, DNA methylation patterns in circulating tumor DNA

DNA methylation profiling of human hepatocarcinogenesis

G Hernandez‐Meza, J von Felden… - …, 2021 - Wiley Online Library
… (10) In total, this study analyzed DNA methylation profiles of 390 tissue samples (246
previously reported(10) and 144 newly analyzed for this study) from a total of 248 patients (Fig. 1). …