… Because DNA methylation is reversible, there is … by DNA-binding transcription factors. We
discuss several models that, by incorporating sequence motifs, CpG density, and methylation …

… Although proteins from cell extracts are in a more native state in the MS/MS-based approach,
the DNA probes used in this approach are typically generic and, therefore, sequence …

… Sequence-specific TFs might also be involved in maintaining DNA methylation states. For
example, ZFP57, which binds to mCpGs, was found to be necessary for the maintenance of …

… Because our goal was to identify DNA methylation-dependent binding activity, we developed
a competition assay on a protein microarray to identify TFs that prefer DNA motifs carrying …

… DNA methylation in the active modulation of TF binding, we quantified the effect of DNA
methylation … , an abundant TF with known methylation sensitivity that is capable of autonomous …

… To further test the relationship between occupancy and methylation state, we next focused
our analysis exclusively on CpGs that reside within a CTCF motif. We and others have …

… Consistently, aberrant DNA methylation patterns play a role in the loss of allele-specific … of
mammalian DNA methylation is transitioning between, rather than maintaining cellular states. …

… states are instructive for TF binding remains mainly unknown 1,2 . To explore the contribution
of DNA methylation … in murine stem cells in the presence and absence of DNA methylation. …

… at the genome scale, and nowadays at the single-base resolution, in different physiological
and pathological states, unraveled that local changes in DNA methylation contribute to cell-…

… b, A transcription factor binds specifically to the methylated state of its binding site. c, A
methylation-sensitive transcription factor … ) proteins bind to the methylated state, leading to indirect …