Automated feature detection and imaging for high-resolution screening of zebrafish embryos

R Peravali, J Gehrig, S Giselbrecht, DS Lütjohann… - …, 2011 - Future Science
… The developmental stage of embryos was determined as previously described (21). … spatial
reporter gene expression patterns within the embryonic brain, often observed in transgenic …

Identification of 315 genes essential for early zebrafish development

A Amsterdam, RM Nissen, Z Sun… - Proceedings of the …, 2004 - National Acad Sciences
… the July 2003 annotation of the zebrafish genome found a similar … our list of 315
embryonic-essential zebrafish genes, however… for diverse developmental processes in the …

Zebrafish genetics and vertebrate heart formation

DYR Stainier - Nature Reviews Genetics, 2001 - nature.com
Zebrafish embryos are well suited to studies of heart … generated zebrafish mutants that have
a range of developmental … The miles apart gene was isolated recently 68 and its isolation …

Developmental activation of the capability to undergo checkpoint-induced apoptosis in the early zebrafish embryo

R Ikegami, P Hunter, TD Yager - Developmental biology, 1999 - Elsevier
… the developmental activation, in the zebrafish embryo, of a … of this mechanism by exposing
embryos to camptothecin, an agent … total zebrafish genomic DNA probe. Untreated control …

Headwaters of the zebrafish—emergence of a new model vertebrate

DJ Grunwald, JS Eisen - Nature reviews genetics, 2002 - nature.com
zebrafish research, from the assembly of the first genetic and embryological tools through to
sequencing of the genome… acquired restricted developmental fates at early stages of embryo-…

The Fanconi anemia/BRCA gene network in zebrafish: embryonic expression and comparative genomics

TA Titus, YL Yan, C Wilson, AM Starks… - Mutation Research …, 2009 - Elsevier
… Consistent with this idea, many developmental gene regulators have complicated gene
expression patterns and both duplicates remain preserved. An example is the lhx1a/lhx1b and …

[HTML][HTML] Enhancers reside in a unique epigenetic environment during early zebrafish development

LJT Kaaij, M Mokry, M Zhou, M Musheev, G Geeven… - Genome biology, 2016 - Springer
developmental stages and that they are physically associated with the transcriptional start
site of target genes, irrespective of target gene … or even absent in zebrafish embryos 3–10 hpf […

[HTML][HTML] The developmental miRNA profiles of zebrafish as determined by small RNA cloning

PY Chen, H Manninga, K Slanchev… - Genes & …, 2005 - genesdev.cshlp.org
zebrafish genome, but we noticed that some of these sequences matched bacterial genomic
… The embryonic developmental stages are indicated in hours (h). Adult male (Am), adult …

Stages in the development of a model organism as a platform for mechanistic models in developmental biology: Zebrafish, 1970–2000

R Meunier - Studies in History and Philosophy of Science Part C …, 2012 - Elsevier
feature that makes the zebrafish particularly suitable for developmental studies is that the
embryos … It was the first Zebrafish gene to be cloned by this approach, on which Talbot acquired …

[HTML][HTML] A digital framework to build, visualize and analyze a gene expression atlas with cellular resolution in zebrafish early embryogenesis

C Castro-González, MA Luengo-Oroz… - PLoS computational …, 2014 - journals.plos.org
… expression patterns observed in different analyzed embryos with phenotypic variability … 6
gene expression templates from a cohort of zebrafish early embryos spanning 6 developmental