Deciphering the epigenetic code: an overview of DNA methylation analysis methods

M Umer, Z Herceg - Antioxidants & redox signaling, 2013 - liebertpub.com
… In this review, we summarize methodologies for DNA methylation analysis and recent …
For more comprehensive overviews of methodologies for epigenetic/epigenomic analysis, …

DNA methylation analysis: choosing the right method

S Kurdyukov, M Bullock - Biology, 2016 - mdpi.com
… is to inform biologists studying DNA methylation of the pros and … when choosing a method
for DNA methylation analysis: … of de novo epigenetic changes or the investigation of known …

Quantification of epigenetic biomarkers: an evaluation of established and emerging methods for DNA methylation analysis

N Redshaw, JF Huggett, MS Taylor, CA Foy… - BMC genomics, 2014 - Springer
DNA methylation is an important epigenetic mechanism in several human diseases, most
notably cancer. The quantitative analysis of DNA methylation … to quantify methylation status. To …

DNA methylation analysis techniques

C Dahl, P Guldberg - Biogerontology, 2003 - Springer
… The term epigenetic is used to denote that methylation can modify the information content
of … All methods for gene-specific methylation analysis described in this review either use …

Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia

L Pei, JH Choi, J Liu, EJ Lee, B McCarthy, JM Wilson… - Epigenetics, 2012 - Taylor & Francis
… an epigenetic mechanism is involved in the constitutive activation of NFAT activity in CLL cells.
… comprehensive DNA methylation analysis will further our understanding of the epigenetic

Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
… across the genome is vital to understanding the influence of epigenetics. There has … of DNA
methylation analysis, with a particular emphasis on genome-scale DNA methylation analysis

Genome-wide DNA methylation analysis identifies candidate epigenetic markers and drivers of hepatocellular carcinoma

Y Zheng, Q Huang, Z Ding, T Liu, C Xue… - Briefings in …, 2018 - academic.oup.com
… analyzing DNA methylation and gene expression data, we identified 222 candidate epigenetic
… In summary, this study systematically characterized the DNA methylation alterations and …

Genome-wide DNA methylation analysis predicts an epigenetic switch for GATA factor expression in endometriosis

MT Dyson, D Roqueiro, D Monsivais, CM Ercan… - PLoS …, 2014 - journals.plos.org
Epigenetic defects affecting the uterine physiological response to ovarian hormones are …
progression are differentially methylated. Here we compared DNA methylation with gene …

Single-cell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos

C Lorthongpanich, LF Cheow, S Balu, SR Quake… - science, 2013 - science.org
… various DNA-methylation errors at multiple loci, to reveal failed maintenance of epigenetic
mark … This study not only details the epigenetic reprogramming dynamics in early mammalian …

Genome-wide brain DNA methylation analysis suggests epigenetic reprogramming in Parkinson disease

JI Young, SK Sivasankaran, L Wang, A Ali… - Neurology …, 2019 - AAN Enterprises
… This initial study of DNA methylation changes in the DMV, SN, and CG supports our
hypothesis of an epigenetic contribution to PD risk. Whether the identified changes are inherited, …