Genome-wide DNA methylation analysis identifies candidate epigenetic markers and drivers of hepatocellular carcinoma

Y Zheng, Q Huang, Z Ding, T Liu, C Xue… - Briefings in …, 2018 - academic.oup.com
DNA methylations [13, 14] and prognostic epigenetic … wide DNA methylation data sets from
clinical samples, we are able to systematically characterize the DNA methylation patterns and …

Linking DNA methylation and histone modification: patterns and paradigms

H Cedar, Y Bergman - Nature Reviews Genetics, 2009 - nature.com
… The DNA methylation pattern might be one of the main markers that are used for
reconstructing the epigenetic state of the genome following cell division. Regions that have a …

Chemoenzymatic labeling of DNA methylation patterns for single-molecule epigenetic mapping

T Gabrieli, Y Michaeli, S Avraham… - Nucleic acids …, 2022 - academic.oup.com
… , including methylation in the CpG context, we checked if the CpG methylation patterns from
… should have lower levels of non-methylated CpG sites compared to surrounding regions). …

Intragenic DNA methylation: implications of this epigenetic mechanism for cancer research

N Shenker, JM Flanagan - British journal of cancer, 2012 - nature.com
… across the gene (so-called intragenic or gene body methylation) may have a role … DNA
methylation profiling studies now support this notion, although whether DNA methylation patterns

Epigenetics: interaction of DNA methylation and chromatin

M Nakao - Gene, 2001 - Elsevier
… in DNA sequence” (Wolffe and Matzke, 1999). The definition agrees with the central theme
of this review that epigenetics is achieved by DNA methylation … Hence, epigenetics can be …

Stilbenoids remodel the DNA methylation patterns in breast cancer cells and inhibit oncogenic NOTCH signaling through epigenetic regulation of MAML2 …

K Lubecka, L Kurzava, K Flower, H Buvala… - …, 2016 - academic.oup.com
… of stilbenoids on DNA methylation patterns and elucidate a possible molecular mechanism,
we examined, using Illumina 450K array, genome-wide patterns of DNA methylation in …

Epigenetic consequences of foreign DNA insertions: de novo methylation and global alterations of methylation patterns in recipient genomes

W Doerfler - Reviews in medical virology, 2011 - Wiley Online Library
DNA methylation patterns in the recipient genome at and remote from the site of foreign DNA
… trans-effect of foreign DNA insertion on cellular DNA methylation patterns was not limited to …

Epigenetic variability in systemic lupus erythematosus: what we learned from genome-wide DNA methylation studies

M Teruel, AH Sawalha - Current rheumatology reports, 2017 - Springer
DNA methylation has emerged as an important contributing factor in the pathogenesis of …
Here, we describe the DNA methylation patterns identified in SLE and how these epigenetic

Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes

CR Farthing, G Ficz, RK Ng, CF Chan, S Andrews… - PLoS …, 2008 - journals.plos.org
… the only known epigenetic modification of DNA in vertebrates. DNA methylation patterns are
DNA methylation has key roles in epigenetic gene regulation and silencing, in particular in …

DNA methylation and epigenetic inheritance

R Holliday, T Ho - Methods, 2002 - Elsevier
… (2) The cells must be actively synthesizing DNA when treated. (3) There must be a period
of recovery after treatment, when new DNA methylation patterns are established and enzyme …