[HTML][HTML] Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes

CR Farthing, G Ficz, RK Ng, CF Chan, S Andrews… - PLoS …, 2008 - journals.plos.org
… subsequent de novo methylation. It has been suggested that epigenetic reprogramming may
be … We have carried out a genome-wide promoter analysis of DNA methylation in mouse …

Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue-and individual-specific DNA methylation patterns

HM Byun, KD Siegmund, F Pan… - Human molecular …, 2009 - academic.oup.com
… , but we have little information about person-specific DNA methylation. Here, we analyze the
DNA methylation patterns of … We used a hierarchical cluster analysis of 905 autosomal DNA

A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data

H Feng, KN Conneely, H Wu - Nucleic acids research, 2014 - academic.oup.com
DNA methylation is an important epigenetic modification that … enabled the measurement
of DNA methylation at single nucleotide … In DNA methylation studies, a key task is to identify …

Hunting for the 5th base: Techniques for analyzing DNA methylation

O Ammerpohl, JI Martín-Subero, J Richter… - … et Biophysica Acta (BBA …, 2009 - Elsevier
… expression, DNA methylation is one of the key players in the field of epigenetics, involved in
… (C) Hierarchical cluster analysis of DNA methylation data obtained from 22 tumor cell line …

Triple analysis of the cancer epigenome: an integrated microarray system for assessing gene expression, DNA methylation, and histone acetylation

H Shi, SH Wei, YW Leu, F Rahmatpanah, JC Liu… - Cancer research, 2003 - AACR
… , DNA methylation, and histone acetylation in parallel, and to dissect the complex hierarchy
of epigenetic … ) was used to assess effects of epigenetic treatments on a human epithelial …

DNA methylation profiles between airway epithelium and proxy tissues in children

R Brugha, R Lowe, AJ Henderson… - Acta …, 2017 - Wiley Online Library
Hierarchical cluster dendrogram of DNA methylation by tissue … information, future studies of
the epigenetics of asthma are likely to … We acknowledge, though, that blood DNA methylation

[HTML][HTML] DNA Methylation Changes Separate Allergic Patients from Healthy Controls and May Reflect Altered CD4+ T-Cell Population Structure

CE Nestor, F Barrenäs, H Wang, A Lentini… - PLoS …, 2014 - journals.plos.org
… indicate the importance of epigenetic mechanisms like DNA methylation to disease pathology.
… In contrast, unsupervised hierarchical clustering of all probes by DNA methylation profile …

Epigenetic reprogramming of cancer cells via targeted DNA methylation

AG Rivenbark, S Stolzenburg, AS Beltran, X Yuan… - Epigenetics, 2012 - Taylor & Francis
epigenetically target gene expression in cancer cells. We show that site-specific DNA
methylationhierarchy? Genes Cancer 2011; 2:607-17; PMID:21941617; http:// dx.doi.org/10.1177/…

Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects

BG Hunt, KM Glastad, SV Yi… - Genome biology and …, 2013 - academic.oup.com
… intragenic DNA methylation levels in the fire ant and honey bee to comprehensive epigenetic
and … measures produced by the Ward hierarchical clustering method with dendrograms …

Mechanisms of human DNA methylation, alteration of methylation patterns in physiological processes and oncology

A Sergeeva, K Davydova, A Perenkov, M Vedunova - Gene, 2023 - Elsevier
DNA methylation is one of the epigenetic modifications of the genome, the essence of
which is the attachment of a methyl group to nitrogenous bases. In the eukaryote genome, …