Regulated AtHKT1 Gene Expression by a Distal Enhancer Element and DNA Methylation in the Promoter Plays an Important Role in Salt Tolerance

D Baek, J Jiang, JS Chung, B Wang… - Plant and Cell …, 2011 - academic.oup.com
… gene expression and its regulation. We found that a distal enhancer element and small
RNA-mediated DNA methylation are involved in tissue-specific and regulated expression of …

Exploring DNA methylation changes in promoter, intragenic, and intergenic regions as early and late events in breast cancer formation

GH Rauscher, JK Kresovich, M Poulin, L Yan, V Macias… - BMC cancer, 2015 - Springer
… Indeed, examples of the latter were seen in our bioinformatic analyses of databases for DNA
methylation and expression in breast cancers (TCGA) and in cultured cells (ENCODE). For …

Expression and promoter DNA methylation of MLH1 in colorectal cancer and lung cancer

Y Ma, Y Chen, I Petersen - Pathology-Research and Practice, 2017 - Elsevier
… Aberrant DNA methylation is a common molecular feature in human cancer. The aims of
this study were to analyze the methylation status of MLH1, one of the DNA mismatch repair (…

Correlation patterns between DNA methylation and gene expression in the cancer genome atlas

JCG Spainhour, HS Lim, SV Yi, P Qiu - Cancer informatics, 2019 - journals.sagepub.com
… of DNA methylation on gene expression has linked methylation of CpG sites in the gene
promoter region with the decrease in gene expression. … this traditional role of DNA methylation. …

Evolutionary transition of promoter and gene body DNA methylation across invertebrate–vertebrate boundary

TE Keller, P Han, SV Yi - Molecular biology and evolution, 2016 - academic.oup.com
… the impact of promoter DNA methylation on gene expression while … , promoter DNA methylation
is consistently positively correlated with gene expression when gene body methylation is …

Chimeric DNA methyltransferases target DNA methylation to specific DNA sequences and repress expression of target genes

F Li, M Papworth, M Minczuk, C Rohde… - Nucleic acids …, 2007 - academic.oup.com
… have demonstrated that DNA methylation can be targeted to predetermined promoter regions
and efficiently repress reporter gene expression. Targeted DNA methylation was achieved …

Suppression of metallothionein gene expression in a rat hepatoma because of promoter-specific DNA methylation

K Ghoshal, S Majumder, Z Li, X Dong… - Journal of Biological …, 2000 - ASBMB
… of promoter methylation at all the 21 CpG dinucleotides that span the region from −225 bp
to +1 bp. By contrast, none of these CpG dinucleotides were methylated in … -I promoter in the …

DNA methylation is associated with altered gene expression in AMD

A Hunter, PA Spechler, A Cwanger… - … & visual science, 2012 - iovs.arvojournals.org
… Coupling expression results to DNA bisulfite sequencing with the Infinium … a significant
methylation change of promoter CpG sites that corresponded to altered expression of 63 genes. …

Changes in correlation between promoter methylation and gene expression in cancer

M Moarii, V Boeva, JP Vert, F Reyal - BMC genomics, 2015 - Springer
… To gain further insight into the role of DNA methylation in … concerned are already lowly
expressed in normal tissues, as … between promoter methylation level and gene expression within …

DNA methylation and transcriptional noise

I Huh, J Zeng, T Park, SV Yi - Epigenetics & chromatin, 2013 - Springer
… Furthermore, we show that promoter DNA methylation is also … noise and DNA methylation,
using gene expression variability … relationship between gene expression abundance and …