Cell type–specific gene expression differences in complex tissues

SS Shen-Orr, R Tibshirani, P Khatri, DL Bodian… - Nature …, 2010 - nature.com
… , we compared deconvoluted and measured differences in gene expression between tissues.
Akin to fold change, all probes whose estimated abundance difference was greater than a …

Evaluation of genetic variation contributing to differences in gene expression between populations

W Zhang, S Duan, EO Kistner, WK Bleibel… - The American Journal of …, 2008 - cell.com
… known human genes (… gene-expression differences between these two populations, to
identify what biological processes or pathways are enriched in the differentially expressed genes

DNA methylation and gene expression differences in children conceived in vitro or in vivo

S Katari, N Turan, M Bibikova, O Erinle… - Human molecular …, 2009 - academic.oup.com
… blood and measured gene expression levels of a subset of genes that differed in … differences
are associated with gene expression differences at both imprinted and non-imprinted genes

Common genetic variants account for differences in gene expression among ethnic groups

RS Spielman, LA Bastone, JT Burdick, M Morley… - Nature …, 2007 - nature.com
… Populations differ in prevalence of many complex genetic diseases, such as diabetes and …
the level of gene expression, our results suggest that allele frequency differences at regulatory …

Application of cDNA microarrays to examine gene expression differences in schizophrenia

MP Vawter, T Barrett, C Cheadle, BP Sokolov… - Brain research …, 2001 - Elsevier
… Using cDNA microarrays we have investigated gene expression patterns in brain regions
of patients with schizophrenia. A cDNA neuroarray, comprised of genes related to brain …

Comparative studies of gene expression and the evolution of gene regulation

IG Romero, I Ruvinsky, Y Gilad - Nature Reviews Genetics, 2012 - nature.com
differences in epigenetic markers can probably explain a substantial fraction of gene expression
differences … Alternative explanations for gene expression differences between species, …

Gene expression differences associated with human papillomavirus status in head and neck squamous cell carcinoma

RJC Slebos, Y Yi, K Ely, J Carter, A Evjen, X Zhang… - Clinical cancer …, 2006 - AACR
… For these reasons, we believe that the observed gene expression differences are based
on the presence or absence of HPV rather than on any hypothetical differences between …

Gene-expression variation within and among human populations

JD Storey, J Madeoy, JL Strout, M Wurfel… - The American Journal of …, 2007 - cell.com
… We next investigated the magnitude of expression differences observed within and among
populations, which, in general, was relatively small (fig. 2). For example, of the ∼83% of …

Evolution of primate gene expression

P Khaitovich, W Enard, M Lachmann… - Nature Reviews …, 2006 - nature.com
… In conclusion, most studies of gene expression evolution to date are compatible with the
notion that most expression differences between species are selectively neutral or nearly neutral…

Gene expression profiling identifies significant differences between the molecular phenotypes of bone marrow–derived and circulating human CD34+ hematopoietic …

U Steidl, R Kronenwett, UP Rohr, R Fenk… - Blood, The Journal …, 2002 - ashpublications.org
Expression of 5 apoptosis driving genes was also 2 to 3 times greater in PB-CD34 + cells,
reflecting a higher apoptotic activity. In summary, our study provides a gene expression profile …